BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P06
(502 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease pr... 24 2.5
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 7.7
>AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease
protein.
Length = 435
Score = 24.2 bits (50), Expect = 2.5
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Frame = +3
Query: 159 VWALGVPVQSSTWEGWQHV-----TQMFPGIRKPTL 251
+W + +P W G+Q V TQ F G P L
Sbjct: 308 IWPICMPPLDDAWTGYQAVVTGWGTQFFGGPHSPVL 343
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 22.6 bits (46), Expect = 7.7
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = +2
Query: 224 VSWNKKTNPEPWEEYRTKQYKFYSPTRDYSKEESP 328
V ++ +P P + +T QY++ P R + P
Sbjct: 57 VHHHRAQDPTPQQYIQTDQYQYAQPQRQHPSLVGP 91
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,320
Number of Sequences: 2352
Number of extensions: 11480
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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