Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P06
         (502 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071513-1|AAL49135.1|   83|Drosophila melanogaster RE56733p pro...   136   2e-32
AE014296-3770|AAN11412.1|   83|Drosophila melanogaster CG32230-P...   136   2e-32
AE014296-3769|AAN11411.1|   83|Drosophila melanogaster CG32230-P...   136   2e-32
AE013599-534|AAF59173.2|  403|Drosophila melanogaster CG17853-PA...    30   2.0  

>AY071513-1|AAL49135.1|   83|Drosophila melanogaster RE56733p
           protein.
          Length = 83

 Score =  136 bits (329), Expect = 2e-32
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = +2

Query: 98  MQGLSIASLKKHKALIPLYVCVGIGCAGAVFYLGRLATRNPDVSWNKKTNPEPWEEYRTK 277
           MQGL + SLKK+ ALIPLYVCVG G  GAV+Y+ RLATRNPDV+WN+ +NPEPW+EY+ K
Sbjct: 1   MQGLGLQSLKKNPALIPLYVCVGAGAIGAVYYMARLATRNPDVTWNRTSNPEPWQEYKEK 60

Query: 278 QYKFYSPTRDYSKEESPAPKY 340
           QYKFYSP RDYSK +S AP +
Sbjct: 61  QYKFYSPVRDYSKTKSAAPNF 81


>AE014296-3770|AAN11412.1|   83|Drosophila melanogaster CG32230-PB,
           isoform B protein.
          Length = 83

 Score =  136 bits (329), Expect = 2e-32
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = +2

Query: 98  MQGLSIASLKKHKALIPLYVCVGIGCAGAVFYLGRLATRNPDVSWNKKTNPEPWEEYRTK 277
           MQGL + SLKK+ ALIPLYVCVG G  GAV+Y+ RLATRNPDV+WN+ +NPEPW+EY+ K
Sbjct: 1   MQGLGLQSLKKNPALIPLYVCVGAGAIGAVYYMARLATRNPDVTWNRTSNPEPWQEYKEK 60

Query: 278 QYKFYSPTRDYSKEESPAPKY 340
           QYKFYSP RDYSK +S AP +
Sbjct: 61  QYKFYSPVRDYSKTKSAAPNF 81


>AE014296-3769|AAN11411.1|   83|Drosophila melanogaster CG32230-PA,
           isoform A protein.
          Length = 83

 Score =  136 bits (329), Expect = 2e-32
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = +2

Query: 98  MQGLSIASLKKHKALIPLYVCVGIGCAGAVFYLGRLATRNPDVSWNKKTNPEPWEEYRTK 277
           MQGL + SLKK+ ALIPLYVCVG G  GAV+Y+ RLATRNPDV+WN+ +NPEPW+EY+ K
Sbjct: 1   MQGLGLQSLKKNPALIPLYVCVGAGAIGAVYYMARLATRNPDVTWNRTSNPEPWQEYKEK 60

Query: 278 QYKFYSPTRDYSKEESPAPKY 340
           QYKFYSP RDYSK +S AP +
Sbjct: 61  QYKFYSPVRDYSKTKSAAPNF 81


>AE013599-534|AAF59173.2|  403|Drosophila melanogaster CG17853-PA
           protein.
          Length = 403

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -1

Query: 490 LFKKMIINYNTYQFSTLDQGLNNQQPPFITYLLFIN--LEKTKLF 362
           L+   ++ Y  Y  STL  GL + + P+ TY  FIN  +++T+++
Sbjct: 140 LYLTFVVVYVLYATSTLLDGLLHHRVPYNTYYPFINWRVDRTQMY 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,173,774
Number of Sequences: 53049
Number of extensions: 482599
Number of successful extensions: 1209
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)