Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P06
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    28   0.063
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    28   0.063
AY078399-1|AAL83702.1|   31|Apis mellifera major royal jelly pro...    21   7.2  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.5  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 0.063
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 263 LPKVQGWFSYSRKHLGYVLPAFPSRRLH 180
           +PK QG+ SY R +L  V+  FP++ L+
Sbjct: 63  IPKEQGFLSYWRGNLANVIRYFPTQALN 90


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 0.063
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 263 LPKVQGWFSYSRKHLGYVLPAFPSRRLH 180
           +PK QG+ SY R +L  V+  FP++ L+
Sbjct: 63  IPKEQGFLSYWRGNLANVIRYFPTQALN 90


>AY078399-1|AAL83702.1|   31|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 31

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 149 LYVCVGIGCAGAV 187
           +  C+GI C GA+
Sbjct: 7   MVACLGIACQGAI 19


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 149 LYVCVGIGCAGAV 187
           +  C+GI C GA+
Sbjct: 7   MVACLGIACQGAI 19


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 149 LYVCVGIGCAG 181
           L VC+GI C G
Sbjct: 7   LVVCLGIACQG 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,942
Number of Sequences: 438
Number of extensions: 3589
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)