Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P05
(384 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 144 6e-36
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 126 2e-30
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 109 1e-25
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 108 3e-25
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 103 1e-23
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 98 4e-22
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 96 1e-21
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 95 4e-21
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 94 6e-21
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 92 3e-20
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 86 2e-18
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 84 6e-18
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 83 2e-17
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 82 3e-17
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 81 8e-17
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 79 2e-16
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 77 1e-15
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 76 2e-15
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 75 5e-15
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 73 1e-14
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 61 5e-11
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 61 7e-11
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 55 3e-09
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 54 1e-08
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 53 1e-08
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 52 2e-08
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 52 2e-08
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 48 5e-07
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 47 9e-07
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 35 0.004
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 28 0.44
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 28 0.44
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 28 0.58
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 27 1.3
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 27 1.3
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 26 1.8
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 26 2.3
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 26 2.3
SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr 2|||... 25 3.1
SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces... 25 3.1
SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4 |Schizosac... 25 3.1
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 25 4.1
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 25 5.4
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||... 25 5.4
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 5.4
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 24 7.1
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 24 7.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 24 9.4
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 24 9.4
SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core ... 24 9.4
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 24 9.4
SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces p... 24 9.4
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 24 9.4
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 144 bits (348), Expect = 6e-36
Identities = 64/125 (51%), Positives = 96/125 (76%)
Frame = +2
Query: 5 EEENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERD 184
++ +L ++E+ +++D K +IF TKR A++ITR +R+ GWPA+ +HGDK Q ERD
Sbjct: 352 DKRARLGKDIEEVLKDRDN--KVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERD 409
Query: 185 EVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTS 364
VL +F+ G+S I+VATDVA+RG+DV GI +V N+D+P ++EDY+HRIGRTGR+ A GT+
Sbjct: 410 WVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTA 469
Query: 365 YAFFS 379
Y +F+
Sbjct: 470 YTYFT 474
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 126 bits (303), Expect = 2e-30
Identities = 58/126 (46%), Positives = 84/126 (66%)
Frame = +2
Query: 2 HEEENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQER 181
H E+++ L +I P T+IFVETKR A+ +T + +PA +HGD+TQ+ER
Sbjct: 410 HVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRER 469
Query: 182 DEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGT 361
+ L F+ GR+SI+VAT VA+RGLD+ + +VIN+D P +DY+HRIGRTGR+ G
Sbjct: 470 ERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQ 529
Query: 362 SYAFFS 379
+ AFF+
Sbjct: 530 AVAFFN 535
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 109 bits (263), Expect = 1e-25
Identities = 48/127 (37%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Frame = +2
Query: 8 EENKLNVLLQEIGQ--NQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQER 181
EE+K + LL+ +G+ N +T++FV+ + A+ + ++ + G+ + +HG K Q +R
Sbjct: 648 EESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDR 707
Query: 182 DEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGT 361
D + +K G +L+AT V ARGLDV ++ V+N+D PN EDY+HR+GRTGR+ G
Sbjct: 708 DSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGV 767
Query: 362 SYAFFSP 382
+ F +P
Sbjct: 768 AVTFITP 774
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 108 bits (259), Expect = 3e-25
Identities = 48/117 (41%), Positives = 72/117 (61%)
Frame = +2
Query: 32 LQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEG 211
++EI ++ IIFV KR E I + + GW AV +HG K+Q++R+ + Q +
Sbjct: 506 VEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNK 565
Query: 212 RSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAFFSP 382
+ ILVATD+A RG+D+ + V+N++ S EDY HRIGRTGR+ +GT+ F P
Sbjct: 566 TADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGP 622
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 103 bits (246), Expect = 1e-23
Identities = 53/125 (42%), Positives = 78/125 (62%)
Frame = +2
Query: 8 EENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDE 187
+E L+ LL++ + K +IFV K++A + + R + V +HGD +Q R +
Sbjct: 399 KERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLARK-YNVVGIHGDMSQGARLQ 457
Query: 188 VLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSY 367
L FK G+ +LVATDVAARGLD+ ++ VIN +P + EDY+HRIGRTGR+ GT+
Sbjct: 458 ALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAI 517
Query: 368 AFFSP 382
FF+P
Sbjct: 518 TFFTP 522
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 98.3 bits (234), Expect = 4e-22
Identities = 41/102 (40%), Positives = 65/102 (63%)
Frame = +2
Query: 68 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 247
+ +IF ++RK + +T +R + MHG+ Q+ERD ++ F++G S +L+ TD+ A
Sbjct: 262 QAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWA 321
Query: 248 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAF 373
RG+DV + VIN+D P + E+YIHRIGR+GR G + F
Sbjct: 322 RGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINF 363
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 96.3 bits (229), Expect = 1e-21
Identities = 43/102 (42%), Positives = 63/102 (61%)
Frame = +2
Query: 68 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 247
+ +IF T+RK + +T + + MHGD Q +RD ++++F+ G S IL+ TD+ A
Sbjct: 260 QAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLA 319
Query: 248 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAF 373
RG+DV + VIN+D P + E+YIHRIGR GR G S F
Sbjct: 320 RGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINF 361
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 94.7 bits (225), Expect = 4e-21
Identities = 45/118 (38%), Positives = 73/118 (61%)
Frame = +2
Query: 26 VLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFK 205
V+L+++ N + + +IFV+ +A+ + + +HG+ Q +R+E L +F+
Sbjct: 276 VILRQMISNGELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFR 335
Query: 206 EGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAFFS 379
+G +L+ATD+ ARG+D G+K VINFD+P S YIHRIGRTGR+ G + FF+
Sbjct: 336 KGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFT 393
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 94.3 bits (224), Expect = 6e-21
Identities = 46/124 (37%), Positives = 72/124 (58%)
Frame = +2
Query: 8 EENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDE 187
+ K+N LL + NQ +IFV++ +A + R +R +P++C+HG Q+ER +
Sbjct: 282 KNRKINDLLDSLEFNQ-----VVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIK 336
Query: 188 VLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSY 367
FK+ I VATDV RG+D++ + VIN+D P+S + Y+HR+GR GR G +
Sbjct: 337 RYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAI 396
Query: 368 AFFS 379
F S
Sbjct: 397 TFSS 400
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 91.9 bits (218), Expect = 3e-20
Identities = 47/107 (43%), Positives = 62/107 (57%)
Frame = +2
Query: 50 NQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILV 229
N+ G IIF T + + +R G+ A+ +HG +Q R L +FK G S LV
Sbjct: 281 NELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLV 340
Query: 230 ATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYA 370
ATDVAARGLD+ + VIN+D P S+ YIHR+GRT R+ G S A
Sbjct: 341 ATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIA 387
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 86.2 bits (204), Expect = 2e-18
Identities = 44/97 (45%), Positives = 59/97 (60%)
Frame = +2
Query: 74 IIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARG 253
IIFV R AE I +R +H + Q+ER L +F+ + ILVATDVA+RG
Sbjct: 262 IIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRG 321
Query: 254 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTS 364
LD+ ++ VINFD P +DYIHR+GRT R+ +G S
Sbjct: 322 LDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGES 358
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 84.2 bits (199), Expect = 6e-18
Identities = 41/120 (34%), Positives = 64/120 (53%)
Frame = +2
Query: 20 LNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQ 199
LN L ++ NQ +IIF + + E + + I G+ H Q R+ V +
Sbjct: 272 LNTLFSKLQINQ-----SIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHN 326
Query: 200 FKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAFFS 379
F+ G LV +D+ RG+D+ + VINFD+P ++E Y+HRIGR+GR G + +F S
Sbjct: 327 FRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFIS 386
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 82.6 bits (195), Expect = 2e-17
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Frame = +2
Query: 8 EENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDE 187
EE+K NVL++ G ++IIF + K AE I R + G C+ G+ +RD
Sbjct: 336 EEHKYNVLVELYGLLTI--GQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDA 393
Query: 188 VLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYP------NSSEDYIHRIGRTGRSK 349
++ F+ G S +LV T+V ARG+DV + V+N+D P + Y+HRIGRTGR
Sbjct: 394 IMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFG 453
Query: 350 ANGTSYAF 373
G S F
Sbjct: 454 RVGVSINF 461
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 82.2 bits (194), Expect = 3e-17
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 68 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 247
K I+F+ + + + + P + +HG + QQ R ++F IL+ T+VAA
Sbjct: 338 KVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAA 397
Query: 248 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR-SKANGTSYAFFSP 382
RGLD+ + +++ +D P+ DYIHR+GRT R +K G S F +P
Sbjct: 398 RGLDIPAVDWIVQYDPPDDPRDYIHRVGRTARGTKGTGKSLMFLAP 443
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 80.6 bits (190), Expect = 8e-17
Identities = 38/97 (39%), Positives = 61/97 (62%)
Frame = +2
Query: 68 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 247
+TIIF +K A + A +HG +Q++R L F++G+ + L+ATDVA+
Sbjct: 506 RTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVAS 565
Query: 248 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANG 358
RG+D+ GI+ VIN++ P + E Y+HR+GRT R+ +G
Sbjct: 566 RGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSG 602
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 79.0 bits (186), Expect = 2e-16
Identities = 34/100 (34%), Positives = 63/100 (63%)
Frame = +2
Query: 71 TIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAAR 250
T++FV TK E ++ + + G+ ++G Q+ R + F+ G++++LV TDVA+R
Sbjct: 349 TLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASR 408
Query: 251 GLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYA 370
G+D+ + VIN+D+P + ++HR+GRT R+ G +Y+
Sbjct: 409 GIDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYS 448
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 77.0 bits (181), Expect = 1e-15
Identities = 37/108 (34%), Positives = 61/108 (56%)
Frame = +2
Query: 59 PGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATD 238
PG KT++F + IT + P+ +H Q++R + L +FK +LV TD
Sbjct: 389 PG-KTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTD 447
Query: 239 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAFFSP 382
VAARG+D+ + +VI++ P++++ Y+HR GRT R+ +G S P
Sbjct: 448 VAARGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSILMCGP 495
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 76.2 bits (179), Expect = 2e-15
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +2
Query: 29 LLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRY-GWPAVCMHGDKTQQERDEVLYQFK 205
LLQ++ + +P ++ I+F+ T + + + + P +H T +R + F+
Sbjct: 282 LLQQL-TSSNPSSRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQRRSITESFR 340
Query: 206 EGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSY 367
+ +S IL ATDV ARG+D I V+ P++++DYIHRIGRTGR+ G +Y
Sbjct: 341 KCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAY 394
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 74.5 bits (175), Expect = 5e-15
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = +2
Query: 68 KTIIFVETKRKAENITRNIRRY--GWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDV 241
KTI+F+ + ++ + RR G + +HG + Q R EV +F R +L TD+
Sbjct: 285 KTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDI 344
Query: 242 AARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAFFSP 382
ARGLD + +VI D P + YIHR+GRT R +G + P
Sbjct: 345 VARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLP 391
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 73.3 bits (172), Expect = 1e-14
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +2
Query: 152 MHGDKTQQERDEVLYQFKEGRSS---ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 322
+HG +QQ R L F S IL+ TDVAARGLD+ + V+ +D P S++DY+H
Sbjct: 473 LHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLH 532
Query: 323 RIGRTGRSKANGTSYAFFSP 382
RIGRT R+ NG + F P
Sbjct: 533 RIGRTARAGHNGAAIMFLLP 552
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 61.3 bits (142), Expect = 5e-11
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +2
Query: 167 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 346
++ ER +++ +F G ++LV +D+ ARG+DV + VIN+D P S Y+HRIGRT R+
Sbjct: 472 SRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDPPLSVRSYVHRIGRTARA 531
Query: 347 KANGTSY 367
G ++
Sbjct: 532 GREGFAW 538
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 60.9 bits (141), Expect = 7e-11
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +2
Query: 68 KTIIFVETKRKAENITRNIRRYGWP--AVCMHGDKTQQERDEVLYQFKEG-RSSILVATD 238
K I+F + E Y P V +HG + Q R +FK+ + ++L TD
Sbjct: 258 KAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNFEKFKKSNKKTVLFTTD 317
Query: 239 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTS 364
+A+RGLD+ + +V+ D P + + HR GR GR+ G +
Sbjct: 318 IASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGRAGVA 359
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 55.2 bits (127), Expect = 3e-09
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2
Query: 245 ARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAFFSP 382
ARGLD + + V+NFD P++++ YIHRIGRT R+ GT+ +F P
Sbjct: 387 ARGLDFENVACVLNFDMPSNTKSYIHRIGRTARAGKPGTAMSFVVP 432
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 53.6 bits (123), Expect = 1e-08
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Frame = +2
Query: 11 ENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRY----------GWPAVCMHG 160
E+ ++ + + Q + +IFVE + AE I R + ++ G AV
Sbjct: 415 EHLERIVTEYFEKEQTKDTRIMIFVEIRSSAEEILRFLGKFYPNVRPAIFIGQSAVRKAA 474
Query: 161 DKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTG 340
+Q+ ++E + QF++G + L+AT + GLD+ + +I +D S + R+GRTG
Sbjct: 475 GMSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRMGRTG 534
Query: 341 RSK 349
R +
Sbjct: 535 RKR 537
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 53.2 bits (122), Expect = 1e-08
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +2
Query: 74 IIFVETKRKAENITRNIRR-YGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAAR 250
II+ ++ E + +R YG A H + ER + +++ G I+VAT
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 251 GLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAFFS 379
G+D +++VI+ +P S E Y GR GR F+S
Sbjct: 806 GVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYS 848
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 52.4 bits (120), Expect = 2e-08
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Frame = +2
Query: 68 KTIIFVETKRKAENITRNIRR---YGWPAVCMH-GDKTQQERDEVLYQFKE--GRSSILV 229
+ IIF TK+ E I R + + + V ++ GD + +ER F+ G++ I++
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMI 1476
Query: 230 ATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAFF 376
AT G++ G++ V+++ P SS DY+ GR GR + F+
Sbjct: 1477 ATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFY 1525
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 52.4 bits (120), Expect = 2e-08
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Frame = +2
Query: 68 KTIIFVETKRKAENITRNIRR---YGWPAVCMH-GDKTQQERDEVLYQFKE--GRSSILV 229
+ IIF TK+ E I R + + + V ++ GD + +ER F+ G++ I++
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMI 1476
Query: 230 ATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAFF 376
AT G++ G++ V+++ P SS DY+ GR GR + F+
Sbjct: 1477 ATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFY 1525
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 48.0 bits (109), Expect = 5e-07
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Frame = +2
Query: 2 HEEENKLNVLLQEIGQNQDPG---AKTIIFVETKRKAENITRNIRRY----------GWP 142
H + N L LL+E ++ G + +IF E + AE IT + G
Sbjct: 448 HPKMNHLLELLKEHFKDTSEGYQNQRVMIFTEFRNTAEYITTTLLAIRPMVRASLFIGQA 507
Query: 143 AVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 322
Q ++ E + QF+ G + LVAT + GLD+ +I +D +S I
Sbjct: 508 NSAYSTGMNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIICYDASSSPIRTIQ 567
Query: 323 RIGRTGRSKA 352
R+GRTGR K+
Sbjct: 568 RMGRTGRKKS 577
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 47.2 bits (107), Expect = 9e-07
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Frame = +2
Query: 17 KLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMH-----GDKTQQE- 178
KL LL+ + D +T+IFVE K A ++ ++ P + H G Q E
Sbjct: 347 KLLELLKATYRKSD-SVRTVIFVERKATAFTLSLFMKTLNLPNIRAHSFIGHGPSDQGEF 405
Query: 179 ------RDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTG 340
+ + L++FK G+ ++L+AT VA G+DV VI F+ + Y+ G
Sbjct: 406 SMTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQ---SRG 462
Query: 341 RSKANGTSYAFF 376
R++A + + F
Sbjct: 463 RARAMASKFLIF 474
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 35.1 bits (77), Expect = 0.004
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 167 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 343
T QER ++ + G+ ++AT+ G+D+ + VI +P S + + GR GR
Sbjct: 595 TVQERRKIESEMFNGKLYGIIATNALELGIDIGSLDAVITIGFPYSLSNLRQQFGRAGR 653
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 28.3 bits (60), Expect = 0.44
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 209 GRSSILVATDVAARGLDVDGIKYVINFDY 295
G ++VAT++A L V GI YV++ Y
Sbjct: 757 GVRKVVVATNIAETSLTVHGISYVVDTGY 785
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 28.3 bits (60), Expect = 0.44
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 209 GRSSILVATDVAARGLDVDGIKYVIN 286
G +++AT++A L +DGI YV++
Sbjct: 777 GGRKVVIATNIAETSLTIDGIYYVVD 802
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 27.9 bits (59), Expect = 0.58
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 167 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 286
T +++ +V EG +VAT+VA + + I+YV++
Sbjct: 712 TTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVD 751
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 26.6 bits (56), Expect = 1.3
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +2
Query: 155 HGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGR 334
+G++ Q+ + + FK ++++ R + +DG+ I +++ED I I +
Sbjct: 122 YGNQINQQETFIRFFFKYSKTNL----SYGVRSIALDGLSKCIETSIQSTNEDLIKEIWK 177
Query: 335 TGRSKANGTS 364
+S N +S
Sbjct: 178 CIKSNLNTSS 187
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 1.3
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 152 MHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 286
+H T E+ V + ++ +T++A + +DGI YV++
Sbjct: 275 LHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVD 319
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 26.2 bits (55), Expect = 1.8
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 361 SSVSFGSSCPTNSMNVILRGIWIIKINHIFDSIHIKTSGSN-ISCYKYTGTTLFK 200
SSVS+ PTN L ++K + +S+ ++TSG N I +K T FK
Sbjct: 210 SSVSW---LPTNKETQFLAVGGMLKFSETTESVFMRTSGRNQIQLWKLENKTNFK 261
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 25.8 bits (54), Expect = 2.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 205 FKLV*YFIPFLLCFVTVHAHSWPSIS 128
+KL +PFL V HA WPS++
Sbjct: 30 YKLWKQNVPFLYDLVITHALEWPSLT 55
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 2.3
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +2
Query: 221 ILVATDVAARGLDVDGIKYVIN 286
++++T++A L +DGI YV++
Sbjct: 354 VVISTNIAETSLTIDGIVYVVD 375
>SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 565
Score = 25.4 bits (53), Expect = 3.1
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +2
Query: 221 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSYAFFSP 382
+ VA RGL + I ++ + S Y H GR G G + F P
Sbjct: 474 VFVANPSEIRGLHLPSITHIFHLWSTFSGVAYQHIAGRLGAMGQTGKIFNFIIP 527
>SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 350
Score = 25.4 bits (53), Expect = 3.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 254 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTS 364
L +D + I YP S EDY + R SK + S
Sbjct: 146 LIIDNLSMPIQLAYPTSPEDYAYLRLRRNTSKKSSLS 182
>SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 25.4 bits (53), Expect = 3.1
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 51 TKTLVQR-PLYLLKLKEKRRTLPEISD 128
+KTL + Y L LKEKR LP +SD
Sbjct: 89 SKTLKKHLEAYELALKEKRLKLPNVSD 115
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 25.0 bits (52), Expect = 4.1
Identities = 9/39 (23%), Positives = 23/39 (58%)
Frame = +2
Query: 170 QQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 286
Q+++ +V ++++T++A + + GI+YVI+
Sbjct: 349 QEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVID 387
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 24.6 bits (51), Expect = 5.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1
Query: 103 GEHYQKYQTIWMASCVH 153
GE+Y+K + IW C++
Sbjct: 14 GENYEKNKDIWRRQCIY 30
>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 709
Score = 24.6 bits (51), Expect = 5.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 264 STSRPLAATSVATSILERPSLNWYNTSSLSCCVLSP 157
S + PLA+ A ++ RP L+W + ++ SP
Sbjct: 371 SAAAPLASAVYALALSIRPDLSWRDIQHITVYSASP 406
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 24.6 bits (51), Expect = 5.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 75 LYLLKLKEKRRTLPEISDDMDG 140
LYL L+EKRRT +S+ +G
Sbjct: 213 LYLESLREKRRTYTPLSEISNG 234
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 24.2 bits (50), Expect = 7.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 276 YLIPSTSRPLAATSVATSILERPS 205
YL + ++P+A+ SVAT I PS
Sbjct: 11 YLSSAPTKPIASGSVATGIDSMPS 34
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 24.2 bits (50), Expect = 7.1
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -3
Query: 295 IIKINHIFDSIHIKTSGSNISCYKY 221
I+ H+ +H+ + S +SCY +
Sbjct: 564 ILAARHLISLVHLLQNHSQLSCYSF 588
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 23.8 bits (49), Expect = 9.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 110 ITRNIRRYGWPAVCMHGDKTQQERDE 187
+TR + W +C HGDK +RDE
Sbjct: 854 LTRTELEHIWN-LCDHGDKGSLDRDE 878
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 23.8 bits (49), Expect = 9.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 190 YFIPFLLCFVTVHAHSWPSISSDIS 116
Y++ L F+ ++ H P +S DIS
Sbjct: 561 YYLDSLKFFLNLYGHKLPVLSMDIS 585
>SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core
protein Qcr2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 426
Score = 23.8 bits (49), Expect = 9.4
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +2
Query: 104 ENITRNIRRYGWPAVCMHG-DKTQQERDEVLYQFKE---GRSSILVATDVAARGLDVDGI 271
++ TRN+RR+ P +HG T ++ + V + +E S+ V + +R G+
Sbjct: 2 KSFTRNLRRFQTPRRNLHGISYTPKKVEGVSFAGRETPTATGSLSVVINAGSRYQPDAGV 61
Query: 272 KYVI-NFDYPNSSEDYIHRIGR 334
+++ F + + E RI R
Sbjct: 62 SHLLEKFAFKTTEERSALRITR 83
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 23.8 bits (49), Expect = 9.4
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 120 ISDDMDGQLCACTVTKHSKKGMKYYTNLKRV 212
IS+D+D L T TK+ ++ + Y N++ +
Sbjct: 314 ISEDIDVCLSKITKTKNGRERREIYKNIREL 344
>SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 23.8 bits (49), Expect = 9.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 272 KYVINFDYPNSSED 313
+Y++NFD PN D
Sbjct: 370 EYILNFDIPNGKSD 383
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 23.8 bits (49), Expect = 9.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 135 PYRLIFLVMFSAFLLVSTNIMVFAPGSW 52
P+R I + +FS L TN+ A G W
Sbjct: 625 PFRFINISVFSIVLYFLTNLKRTAGGFW 652
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,710,804
Number of Sequences: 5004
Number of extensions: 34889
Number of successful extensions: 162
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 126307516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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