Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P05
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   119   3e-29
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    25   1.3  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    22   6.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    22   8.9  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    22   8.9  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  119 bits (287), Expect = 3e-29
 Identities = 55/125 (44%), Positives = 80/125 (64%)
 Frame = +2

Query: 8   EENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDE 187
           E+ K    L+EI    +P   T++FVETKR A+ +   +    +P   +HGD+ Q+ER+ 
Sbjct: 406 EKFKKRKKLEEILNGGNPKG-TLVFVETKRNADYLASLMSETQFPTTSIHGDRLQREREM 464

Query: 188 VLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTSY 367
            LY FK GR  +L+AT VAARGLD+  + +V+N+D P S +DY+HRIGRTGR    G + 
Sbjct: 465 ALYDFKSGRMDVLIATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRIGRTGRVGNKGRAT 524

Query: 368 AFFSP 382
           +F+ P
Sbjct: 525 SFYDP 529


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 218 WNDPL*IGIILHPFLAVFCHRACTQ 144
           WN     G++L   LA  CH AC +
Sbjct: 2   WNSITASGLMLVAALATLCHGACDE 26


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 267 PSTSRPLAATSVATSILER 211
           PS+ RP+   SV   ILER
Sbjct: 487 PSSYRPICLLSVLGKILER 505


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 153 MHTAGHPYRLIFLVMFSAFLLVSTNIMVF 67
           ++TA   +R +F+    +FLL +   M+F
Sbjct: 292 LNTARRCHRFLFVAYLLSFLLSTPQWMIF 320


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 153 MHTAGHPYRLIFLVMFSAFLLVSTNIMVF 67
           ++TA   +R +F+    +FLL +   M+F
Sbjct: 293 LNTARRCHRFLFVAYLLSFLLSTPQWMIF 321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,526
Number of Sequences: 2352
Number of extensions: 7317
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)