Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P05
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.      118   2e-29
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   0.93 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   2.1  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   2.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   4.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   6.5  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              20   8.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    20   8.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   8.6  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score =  118 bits (284), Expect = 2e-29
 Identities = 59/126 (46%), Positives = 82/126 (65%), Gaps = 3/126 (2%)
 Frame = +2

Query: 14  NKLNVLLQEIGQNQ-DPGAK--TIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERD 184
           NK   LL+EI + + D G    T++FVE K+KA+ I   +    +P   +HGD+ Q++R+
Sbjct: 432 NKKKDLLKEILERENDSGTLGGTLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQRE 491

Query: 185 EVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKANGTS 364
           E L  FK GR SILVAT VAARGLD+  + +VIN+D P   ++Y+HRIGRTGR    G +
Sbjct: 492 EALADFKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGIDEYVHRIGRTGRVGNRGRA 551

Query: 365 YAFFSP 382
            +FF P
Sbjct: 552 TSFFDP 557


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = -1

Query: 270  IPSTSRPLAATSVATSILERPSLNWYNTSSLSCCVLSPCMHTAGHPYRLIFLVMFSAFLL 91
            +P TS P ++TS+ +  +E+  +N   T   +        +  G P   + +V  SA  L
Sbjct: 854  VPITSLPASSTSINSITVEKDVINDVKTQITTNTPAKKATNIGGKP---VAVVKSSAQSL 910

Query: 90   VSTN 79
            + +N
Sbjct: 911  LQSN 914


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 11  ENKLNVLLQEIGQN 52
           ENKLN  +++IG N
Sbjct: 217 ENKLNYFIEDIGLN 230


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 86  ETKRKAENITRNIRRYGWPAVCMHGDKTQQERDE 187
           E ++K+    R  R+YG  +     D+T++ER +
Sbjct: 277 EREQKSYKNEREYRKYGETSKERSRDRTERERSK 310


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 174 KKGMKYYTNLKRVVPVYL*QLMLLPEV 254
           KK M  Y   ++ +PVY    ++LP V
Sbjct: 439 KKVMNLYQQYQQSLPVYQYNDLILPGV 465


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 328 NSMNVILRGIWIIKINHIFDSI 263
           NS+ VIL  +   KI H FD +
Sbjct: 229 NSLMVILPDLVGKKITHFFDLV 250


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 184 IPFLLCFVTVHAHSWPSISSD 122
           I  L+C  +VH  + PS  SD
Sbjct: 11  ITCLICSPSVHCGTRPSFVSD 31


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 181 PFLLCFVTVHAHSWPSISSDISGNVL 104
           P+ +   T+H  SW   S++I  N L
Sbjct: 167 PYDILNCTIHIASWSHGSNEIKLNSL 192


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 54  KTLVQRPLYLLKLKEKRRTLPEISDDMDGQ 143
           +TL   P   LK        PEI+ ++DG+
Sbjct: 403 ETLQPGPSMFLKCVASGNPTPEITWELDGK 432


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,691
Number of Sequences: 438
Number of extensions: 2334
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)