Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P04
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    26   0.14 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.74 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   1.3  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   1.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   1.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   2.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   2.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   2.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.0  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   5.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   9.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    20   9.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    20   9.2  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    20   9.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    20   9.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    20   9.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    20   9.2  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    20   9.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    20   9.2  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 325 GKMAATPGR*RARDKAIAEGCAPMPGAGTRLWQ 227
           G+  ATP    A+D AI     P PG+    W+
Sbjct: 74  GQFPATPVIDPAKDPAIYSNLLPRPGSNDNSWE 106


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.74
 Identities = 15/64 (23%), Positives = 30/64 (46%)
 Frame = -1

Query: 237 GCGNGVLFETRSLVSYYPRFRAIGLPFVIQCCHFCLCSICQIRLLSCKCCYVLLNSHFCI 58
           G  + ++F+  +L   Y  F  + + F +    F LCS      L   C +++   HF +
Sbjct: 41  GILDSLVFKCYNLRRIY-YFYCVSITFNVHLL-FLLCSGYFTVHLLFYCPFIIFTVHFLL 98

Query: 57  CSHF 46
           C+++
Sbjct: 99  CTYY 102


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 359 HFSIIAVCRIEYQRILYSYTFLNNE 433
           HF  ++  + E Q +L SY FL  +
Sbjct: 6   HFDEMSYSQFENQAVLQSYNFLQEK 30


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 434 FHYLEMYMSIVSSDILFCTLRL 369
           F Y+++Y   +   +LF TL++
Sbjct: 135 FEYIQLYSQFILYFLLFATLKI 156


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 434 FHYLEMYMSIVSSDILFCTLRL 369
           F Y+++Y   +   +LF TL++
Sbjct: 135 FEYIQLYSQFILYFLLFATLKI 156


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 434 FHYLEMYMSIVSSDILFCTLRL 369
           F Y+++Y   +   +LF TL++
Sbjct: 455 FEYIQLYSQFILYFLLFATLKI 476


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 143 ATFVCVASAKFGC 105
           AT++C A  KF C
Sbjct: 141 ATYICYAFGKFSC 153


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 143 ATFVCVASAKFGC 105
           AT++C A  KF C
Sbjct: 374 ATYICYAFGKFSC 386


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 143 ATFVCVASAKFGC 105
           AT++C A  KF C
Sbjct: 374 ATYICYAFGKFSC 386


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 243 PAPGMGAQPSAIALSRARYRPGVAAIFPAHAQNNATKTDISA 368
           PAPG G QP+    ++ + +     + P H Q+  T+T  SA
Sbjct: 60  PAPGHGLQPTMGDYTQLQPQ----RLAPTHLQSPNTQTHPSA 97


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 114 FGRCYTNKSGNTVLQMATL*RGIAGNMK 197
           FG C    +G +++Q+ T    I  N+K
Sbjct: 239 FGTCLILITGKSIVQLLTCLNFITNNLK 266


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 114 FGRCYTNKSGNTVLQMATL*RGIAGNMK 197
           FG C    +G +++Q+ T    I  N+K
Sbjct: 239 FGTCLILITGKSIVQLLTCLNFITNNLK 266


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 215 NNTPLPQPR 241
           NN PLP PR
Sbjct: 109 NNNPLPSPR 117


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 66  SGYSTERNNICRKATEFGRCYTNK 137
           +G+ T+ NN C     + + Y NK
Sbjct: 479 AGWVTDGNNWCSPYIGWQKVYENK 502


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 243 PAPGMGAQPS 272
           PAPG G QP+
Sbjct: 60  PAPGHGLQPT 69


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 243 PAPGMGAQPS 272
           PAPG G QP+
Sbjct: 60  PAPGHGLQPT 69


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 243 PAPGMGAQPS 272
           PAPG G QP+
Sbjct: 60  PAPGHGLQPT 69


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 243 PAPGMGAQPS 272
           PAPG G QP+
Sbjct: 60  PAPGHGLQPT 69


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 243 PAPGMGAQPS 272
           PAPG G QP+
Sbjct: 60  PAPGHGLQPT 69


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 243 PAPGMGAQPS 272
           PAPG G QP+
Sbjct: 16  PAPGHGLQPT 25


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 243 PAPGMGAQPS 272
           PAPG G QP+
Sbjct: 60  PAPGHGLQPT 69


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 243 PAPGMGAQPS 272
           PAPG G QP+
Sbjct: 60  PAPGHGLQPT 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,278
Number of Sequences: 336
Number of extensions: 2598
Number of successful extensions: 23
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)