Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P04
(444 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 27 0.40
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 26 0.52
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 25 0.91
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 25 0.91
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 25 0.91
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 25 0.91
AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid transpo... 25 1.2
AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding pr... 25 1.6
AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding pr... 25 1.6
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 25 1.6
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 24 2.1
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 23 3.7
AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 23 4.9
AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 23 4.9
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 6.4
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 23 6.4
AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding pr... 22 8.5
AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding pr... 22 8.5
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 26.6 bits (56), Expect = 0.40
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 48 NDYKYKSGYSTERNNICRKATEFGRCYTNKSGNT 149
N ++Y+ S + N+CR F R Y +K+ +T
Sbjct: 448 NRFRYRRYLSKIQRNLCRWPDSFWRFYNSKTKST 481
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 26.2 bits (55), Expect = 0.52
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 19 RGTSKLTTKEMTTNTKVAIQQNVTTFAGKQPNLA 120
+ T+ TT + TT T +TTF G QP A
Sbjct: 124 KSTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCA 157
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 25.4 bits (53), Expect = 0.91
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 25 TSKLTTKEMTTNTKVAIQQNVTTFAGKQPNLA 120
T+ TT + TT T +TTF G QP A
Sbjct: 128 TTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCA 159
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 25.4 bits (53), Expect = 0.91
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 25 TSKLTTKEMTTNTKVAIQQNVTTFAGKQPNLA 120
T+ TT + TT T +TTF G QP A
Sbjct: 128 TTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCA 159
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 25.4 bits (53), Expect = 0.91
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 25 TSKLTTKEMTTNTKVAIQQNVTTFAGKQPNLA 120
T+ TT + TT T +TTF G QP A
Sbjct: 128 TTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCA 159
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 25.4 bits (53), Expect = 0.91
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 25 TSKLTTKEMTTNTKVAIQQNVTTFAGKQPNLA 120
T+ TT + TT T +TTF G QP A
Sbjct: 128 TTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCA 159
>AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid
transporter Ag_AAT8 protein.
Length = 636
Score = 25.0 bits (52), Expect = 1.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 243 VRGCGNGVLFETRSLVSYYPRFRA 172
+RG G G LF +L++YY A
Sbjct: 157 MRGVGYGQLFSVTALITYYSSLMA 180
>AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding
protein AgamOBP32 protein.
Length = 320
Score = 24.6 bits (51), Expect = 1.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 90 NICRKATEFGRCYTNKSGNTVL 155
++C +A E RCY + GN V+
Sbjct: 126 DVCERAYESFRCYYEQYGNIVV 147
>AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding
protein AgamOBP33 protein.
Length = 334
Score = 24.6 bits (51), Expect = 1.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 90 NICRKATEFGRCYTNKSGNTVL 155
++C +A E RCY + GN V+
Sbjct: 126 DVCERAYESFRCYYEQYGNIVV 147
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 24.6 bits (51), Expect = 1.6
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = -1
Query: 345 HYFAHARGRWRRRPVDSALVIRLSLKAAPPCRVPVRGCGN 226
H+F AR R P + ++ PP P G GN
Sbjct: 376 HWFQGARSAPERDPAELRRIVDALFPVHPPVEWPDLGVGN 415
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 24.2 bits (50), Expect = 2.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 218 CLKRGHLFHITRDS 177
CL+RGHL H R S
Sbjct: 480 CLERGHLAHACRSS 493
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 23.4 bits (48), Expect = 3.7
Identities = 12/54 (22%), Positives = 23/54 (42%)
Frame = +2
Query: 149 CITNGNPIARNRG*YETSDLVSNNTPLPQPRTGTRHGGAAFSDSLITSALSTGR 310
C++N N + + + D N + + +TG R D +I A+ G+
Sbjct: 539 CLSNLNKVLSSVITQKVKDHCDTNNVMTEEQTGRRKNTQGCKDQVIIDAVIVGQ 592
>AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.0 bits (47), Expect = 4.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 243 VRGCGNGVLFETRSLVSYYPRFRAIGLPFVI 151
+RG G G + T +++YY A+ + ++I
Sbjct: 153 MRGIGVGQTYSTFIVMTYYASLMAVTMRYLI 183
>AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.0 bits (47), Expect = 4.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 243 VRGCGNGVLFETRSLVSYYPRFRAIGLPFVI 151
+RG G G + T +++YY A+ + ++I
Sbjct: 153 MRGIGVGQTYSTFIVMTYYASLMAVTMRYLI 183
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 22.6 bits (46), Expect = 6.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 260 GAAFSDSLITSALSTGRRRHLPRA 331
G A D LIT L RR+H P A
Sbjct: 2024 GDAILDYLITRHLYEDRRQHSPGA 2047
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 22.6 bits (46), Expect = 6.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 105 ATEFGRCYTNKSGNTVLQ 158
ATE+G TN GN VL+
Sbjct: 125 ATEWGSKSTNARGNAVLE 142
>AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding
protein AgamOBP31 protein.
Length = 313
Score = 22.2 bits (45), Expect = 8.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 72 YSTERNNICRKATEFGRCYTNKSGNTV 152
++ E N C +A E +CY + GN V
Sbjct: 116 HTAELPNNCCQAYETFQCYFREFGNLV 142
>AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding
protein 1 protein.
Length = 304
Score = 22.2 bits (45), Expect = 8.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 72 YSTERNNICRKATEFGRCYTNKSGNTV 152
++ E N C +A E +CY + GN V
Sbjct: 116 HTAELPNNCCQAYETFQCYFREFGNLV 142
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,042
Number of Sequences: 2352
Number of extensions: 11357
Number of successful extensions: 25
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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