Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P04
(444 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens ... 33 0.34
AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens ... 31 1.8
U66469-1|AAC50897.1| 332|Homo sapiens cell growth regulator CGR... 30 3.1
BC015063-1|AAH15063.1| 332|Homo sapiens cell growth regulator w... 30 3.1
AK123603-1|BAC85658.1| 143|Homo sapiens protein ( Homo sapiens ... 30 4.1
Z83844-6|CAB63039.1| 213|Homo sapiens protein ( S domain contai... 29 7.2
CR456463-1|CAG30349.1| 213|Homo sapiens dJ37E16.7 protein. 29 7.2
BC130474-1|AAI30475.1| 723|Homo sapiens tripartite motif-contai... 29 7.2
BC130472-1|AAI30473.1| 723|Homo sapiens tripartite motif-contai... 29 7.2
BC002808-1|AAH02808.1| 213|Homo sapiens NOL12 protein protein. 29 7.2
AL160132-1|CAB77148.1| 213|Homo sapiens hypothetical protein pr... 29 7.2
AK097416-1|BAC05042.1| 708|Homo sapiens protein ( Homo sapiens ... 29 7.2
AF521868-1|AAO14945.1| 723|Homo sapiens tripartite motif protei... 29 7.2
>AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ45585 fis, clone BRTHA3013882. ).
Length = 201
Score = 33.5 bits (73), Expect = 0.34
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 147 CCHFCLCSICQIRLLSCKCCYVLLNSHFCICSHFLSC 37
C CLC +C + + C C V ++ C+C H C
Sbjct: 55 CVSVCLC-VCLVSVCLCVCLCVCVSVCLCVCLHLCVC 90
>AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ46559 fis, clone THYMU3040126. ).
Length = 303
Score = 31.1 bits (67), Expect = 1.8
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 141 HFCLCSICQIRLLSCKC-C-YVLLNSHFCICSH 49
H C+C +I +C C C + +++H C+C H
Sbjct: 94 HMCVCVYTRIYTYTCVCVCTHAYIHTHVCVCVH 126
Score = 29.1 bits (62), Expect = 7.2
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = -1
Query: 141 HFCLCSICQIRLLSCKC-C---YVLLNSHFCICSH 49
H C+C +I +C C C ++ ++ + C+C+H
Sbjct: 170 HMCVCVYTRIYTYTCMCVCVHTHIYIHMYVCVCTH 204
>U66469-1|AAC50897.1| 332|Homo sapiens cell growth regulator CGR19
protein.
Length = 332
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -1
Query: 156 VIQCCHFCLCSICQIRLLSCKCCYVLLNSHFCICS 52
++ C H CLC C C C + F +CS
Sbjct: 286 LLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALCS 320
>BC015063-1|AAH15063.1| 332|Homo sapiens cell growth regulator with
ring finger domain 1 protein.
Length = 332
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -1
Query: 156 VIQCCHFCLCSICQIRLLSCKCCYVLLNSHFCICS 52
++ C H CLC C C C + F +CS
Sbjct: 286 LLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALCS 320
>AK123603-1|BAC85658.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ41609 fis, clone CTONG3001560. ).
Length = 143
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -1
Query: 165 LPFVIQCCHFCLCSICQIRLLSCKCCYVLLNSHFCICSHFL---SC*FTSSSC 16
+P V C C+ S C L+ C C +V L + C C+ F+ +C T+ +C
Sbjct: 59 VPCVCVCAWACVFSCCVRVLVLCVCTHVCLVT-VCACACFVCVHACLVTACAC 110
>Z83844-6|CAB63039.1| 213|Homo sapiens protein ( S domain
containing protein ).).
Length = 213
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 205 PRFKQHPVATTAYRHPAWGRSLQR*PYHERAIDRASPPSSPRMRKIMRQKLT 360
P Q + TA H + ++R + RA D PP +PR K R++LT
Sbjct: 155 PLLSQRISSLTASLHAHSRKKVKR-KHPRRAQDSKKPPRAPRTSKAQRRRLT 205
>CR456463-1|CAG30349.1| 213|Homo sapiens dJ37E16.7 protein.
Length = 213
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 205 PRFKQHPVATTAYRHPAWGRSLQR*PYHERAIDRASPPSSPRMRKIMRQKLT 360
P Q + TA H + ++R + RA D PP +PR K R++LT
Sbjct: 155 PLLSQRISSLTASLHAHSRKKVKR-KHPRRAQDSKKPPRAPRTSKAQRRRLT 205
>BC130474-1|AAI30475.1| 723|Homo sapiens tripartite
motif-containing 42 protein.
Length = 723
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -1
Query: 147 CCHFCLCSICQIRLLSCKCC-YVLLNSHFCIC 55
CC C C +L SC CC ++ + C C
Sbjct: 8 CCPCCTWQRCCPQLCSCLCCKFIFTSERNCTC 39
>BC130472-1|AAI30473.1| 723|Homo sapiens tripartite
motif-containing 42 protein.
Length = 723
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -1
Query: 147 CCHFCLCSICQIRLLSCKCC-YVLLNSHFCIC 55
CC C C +L SC CC ++ + C C
Sbjct: 8 CCPCCTWQRCCPQLCSCLCCKFIFTSERNCTC 39
>BC002808-1|AAH02808.1| 213|Homo sapiens NOL12 protein protein.
Length = 213
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 205 PRFKQHPVATTAYRHPAWGRSLQR*PYHERAIDRASPPSSPRMRKIMRQKLT 360
P Q + TA H + ++R + RA D PP +PR K R++LT
Sbjct: 155 PLLSQRISSLTASLHAHSRKKVKR-KHPRRAQDSKKPPRAPRTSKAQRRRLT 205
>AL160132-1|CAB77148.1| 213|Homo sapiens hypothetical protein
protein.
Length = 213
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 205 PRFKQHPVATTAYRHPAWGRSLQR*PYHERAIDRASPPSSPRMRKIMRQKLT 360
P Q + TA H + ++R + RA D PP +PR K R++LT
Sbjct: 155 PLLSQRISSLTASLHAHSRKKVKR-KHPRRAQDSKKPPRAPRTSKAQRRRLT 205
>AK097416-1|BAC05042.1| 708|Homo sapiens protein ( Homo sapiens
cDNA FLJ40097 fis, clone TESTI2004169. ).
Length = 708
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -1
Query: 147 CCHFCLCSICQIRLLSCKCC-YVLLNSHFCIC 55
CC C C +L SC CC ++ + C C
Sbjct: 8 CCPCCTWQRCCPQLCSCLCCKFIFTSERNCTC 39
>AF521868-1|AAO14945.1| 723|Homo sapiens tripartite motif protein
42 protein.
Length = 723
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -1
Query: 147 CCHFCLCSICQIRLLSCKCC-YVLLNSHFCIC 55
CC C C +L SC CC ++ + C C
Sbjct: 8 CCPCCTWQRCCPQLCSCLCCKFIFTSERNCTC 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,156,431
Number of Sequences: 237096
Number of extensions: 1490505
Number of successful extensions: 3851
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3830
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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