Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P04
         (444 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   0.86 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.1  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   3.5  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   4.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   6.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   8.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   8.0  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.8 bits (49), Expect = 0.86
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 102 KATEFGRCYTNKSGNTVLQMA 164
           +A +FG  Y NK+G+ +L  A
Sbjct: 189 QAIQFGVVYENKNGSVILDTA 209


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
            isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 280  PYHERAIDRASPPSSPRMRKIMRQKLTFQHNRSVQNR 390
            PY++R    + PP+  R  K+++  L F  N  +Q R
Sbjct: 894  PYNQRGTVVSPPPTKRRTMKVVKYHL-FLTNLYIQMR 929


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 280  PYHERAIDRASPPSSPRMRKIMRQKLTFQHNRSVQNR 390
            PY++R    + PP+  R  K+++  L F  N  +Q R
Sbjct: 932  PYNQRGTVVSPPPTKRRTMKVVKYHL-FLTNLYIQMR 967


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 120 CQIRLLSCKCCYV 82
           C + L SCKC YV
Sbjct: 176 CPLILGSCKCIYV 188


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 36  NN*GNDYKYKSGYSTERNN 92
           N+  N+Y Y + Y+   NN
Sbjct: 86  NSLSNNYNYNNNYNNYNNN 104


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 194 ETSDLVSNNTPLPQPRTGTR 253
           +TS ++ N T LPQ   GT+
Sbjct: 278 KTSIILMNGTTLPQIMWGTK 297


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 359 HFSIIAVCRIEY 394
           HF I+  C I+Y
Sbjct: 101 HFGIVGECNIQY 112


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 203 DLVSNNTPLPQPR 241
           D++ NNT + QPR
Sbjct: 132 DILGNNTVIHQPR 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,314
Number of Sequences: 438
Number of extensions: 3074
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)