BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P03
(385 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles ... 32 0.006
AY028785-1|AAK32959.1| 509|Anopheles gambiae cytochrome P450 pr... 25 0.95
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 3.8
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 3.8
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 5.1
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 23 5.1
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 22 8.9
>U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles
gambiae putativecuticle protein mRNA, partial cds. ).
Length = 160
Score = 32.3 bits (70), Expect = 0.006
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 217 REHTEVSDGSGVVRGKFAYVDPRNKVRAVEYVAD-QQGFHPVLSDVP 354
+ E DG VV+G ++ VDP R V+Y AD GF+ V+ P
Sbjct: 38 KSQQESRDGD-VVQGSYSVVDPDGTKRTVDYTADPHNGFNAVVRREP 83
>AY028785-1|AAK32959.1| 509|Anopheles gambiae cytochrome P450
protein.
Length = 509
Score = 25.0 bits (52), Expect = 0.95
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 315 RYVLYSSDLVPRVYVCELASDNSRAIADFGMF 220
RY+ YS +P V VC++ + + DF +F
Sbjct: 73 RYMGYSFFFMPIVMVCDIELVKTVLVKDFAVF 104
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 278 STYANLPLTTPEPSLTSVCSRSTCPG 201
+T P TTP + TS R C G
Sbjct: 707 ATTTKTPTTTPPATTTSTTPRDPCYG 732
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 278 STYANLPLTTPEPSLTSVCSRSTCPG 201
+T P TTP + TS R C G
Sbjct: 706 ATTTKTPTTTPPATTTSTTPRDPCYG 731
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 3 TRRHEGSVLLRNGPARLPSDDKNVEPHVTLA 95
T+R+ +V N P+R P D+ + +LA
Sbjct: 359 TKRYSQTVESTNAPSRSPGPDEEPSVYKSLA 389
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 210 RGPRTYRSQRWLWS 251
RGPRT+R W+ S
Sbjct: 322 RGPRTHRMPMWIRS 335
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 21.8 bits (44), Expect = 8.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 255 QRQVRIRRPSEQGPSCRVRSGPARFPPGAERCASRSPSR 371
QR+ R R S G R RSG SRS SR
Sbjct: 1062 QRRSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRSRSR 1100
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,864
Number of Sequences: 2352
Number of extensions: 8271
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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