Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P03
(385 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73678-1|CAA98022.1| 726|Homo sapiens plakophilin 1 protein. 31 0.96
Z34974-1|CAA84426.1| 726|Homo sapiens plakophilin protein. 31 0.96
BC114571-1|AAI14572.1| 726|Homo sapiens plakophilin 1 (ectoderm... 31 0.96
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 1.7
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 1.7
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 1.7
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 1.7
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 1.7
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 2.9
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 2.9
BC039600-1|AAH39600.1| 1049|Homo sapiens hect domain and RLD 4 p... 29 3.9
AY650033-1|AAV66579.1| 979|Homo sapiens HECT and RCC1 containin... 29 3.9
AY221963-1|AAO65480.1| 1057|Homo sapiens HECT and RCC1 containin... 29 3.9
AL356741-3|CAH74148.1| 1049|Homo sapiens hect domain and RLD 4 p... 29 3.9
AL356741-1|CAH74146.1| 907|Homo sapiens hect domain and RLD 4 p... 29 3.9
AL133551-3|CAI16032.1| 1049|Homo sapiens hect domain and RLD 4 p... 29 3.9
AL133551-1|CAI16031.1| 907|Homo sapiens hect domain and RLD 4 p... 29 3.9
AB046813-1|BAB13419.1| 953|Homo sapiens KIAA1593 protein protein. 29 3.9
BC042482-1|AAH42482.1| 288|Homo sapiens KCTD7 protein protein. 29 5.1
BC035501-1|AAH35501.3| 415|Homo sapiens kazrin protein. 29 5.1
AY505120-1|AAS86435.1| 415|Homo sapiens kazrin isoform B protein. 29 5.1
AL391215-1|CAI13899.1| 415|Homo sapiens novel protein protein. 29 5.1
AL035405-1|CAI19827.1| 415|Homo sapiens novel protein protein. 29 5.1
AK056631-1|BAB71236.1| 289|Homo sapiens protein ( Homo sapiens ... 29 5.1
AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil do... 28 8.9
AF461089-1|AAQ04776.1| 566|Homo sapiens chondroitin sulfate pro... 28 8.9
AF461087-1|AAQ04774.1| 539|Homo sapiens chondroitin sulfate pro... 28 8.9
AF059274-1|AAC69612.1| 539|Homo sapiens neuroglycan C protein. 28 8.9
>Z73678-1|CAA98022.1| 726|Homo sapiens plakophilin 1 protein.
Length = 726
Score = 31.5 bits (68), Expect = 0.96
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 174 RVLLHSGTLPGTRGPRTYRSQRWLWS-CQRQVRIRRPSEQGPSCRVRSGPARFPP 335
R L GTL G++G +T +++ +S C Q I++ + PSC + P PP
Sbjct: 164 RGTLRKGTL-GSKGQKTTQNRYSFYSTCSGQKAIKKCPVRPPSCASKQDPVYIPP 217
>Z34974-1|CAA84426.1| 726|Homo sapiens plakophilin protein.
Length = 726
Score = 31.5 bits (68), Expect = 0.96
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 174 RVLLHSGTLPGTRGPRTYRSQRWLWS-CQRQVRIRRPSEQGPSCRVRSGPARFPP 335
R L GTL G++G +T +++ +S C Q I++ + PSC + P PP
Sbjct: 164 RGTLRKGTL-GSKGQKTTQNRYSFYSTCSGQKAIKKCPVRPPSCASKQDPVYIPP 217
>BC114571-1|AAI14572.1| 726|Homo sapiens plakophilin 1 (ectodermal
dysplasia/skin fragility syndrome) protein.
Length = 726
Score = 31.5 bits (68), Expect = 0.96
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 174 RVLLHSGTLPGTRGPRTYRSQRWLWS-CQRQVRIRRPSEQGPSCRVRSGPARFPP 335
R L GTL G++G +T +++ +S C Q I++ + PSC + P PP
Sbjct: 164 RGTLRKGTL-GSKGQKTTQNRYSFYSTCSGQKAIKKCPVRPPSCASKQDPVYIPP 217
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +3
Query: 207 TRGPRTYRSQRWLWSCQRQVRIRRPSEQGPSCRVRSGPARFPPGAERCASRSPSR 371
TR R +RS+ +S +R+ RR PS R R+ P R PP SRSP R
Sbjct: 296 TRPRRRHRSRSRSYSPRRRPSPRRR----PSPRRRTPPRRMPPPPRHRRSRSPVR 346
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +3
Query: 207 TRGPRTYRSQRWLWSCQRQVRIRRPSEQGPSCRVRSGPARFPPGAERCASRSPSR 371
TR R +RS+ +S +R+ RR PS R R+ P R PP SRSP R
Sbjct: 296 TRPRRRHRSRSRSYSPRRRPSPRRR----PSPRRRTPPRRMPPPPRHRRSRSPVR 346
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +3
Query: 207 TRGPRTYRSQRWLWSCQRQVRIRRPSEQGPSCRVRSGPARFPPGAERCASRSPSR 371
TR R +RS+ +S +R+ RR PS R R+ P R PP SRSP R
Sbjct: 296 TRPRRRHRSRSRSYSPRRRPSPRRR----PSPRRRTPPRRMPPPPRHRRSRSPVR 346
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 207 TRGPRTYRSQRWLWSCQRQVRIRRPS-EQGPSCRVRSGPARFPPGAERCASRSPSR 371
+R P R +R S + RRPS + PS R R+ P R PP SRSP R
Sbjct: 290 SRSPSHTRPRRRHRSDKMYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVR 345
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 207 TRGPRTYRSQRWLWSCQRQVRIRRPS-EQGPSCRVRSGPARFPPGAERCASRSPSR 371
+R P R +R S + RRPS + PS R R+ P R PP SRSP R
Sbjct: 290 SRSPSHTRPRRRHRSDKMYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVR 345
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 273 RRPS-EQGPSCRVRSGPARFPPGAERCASRSPSR 371
RRPS + PS R R+ P R PP SRSP R
Sbjct: 308 RRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVR 341
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 273 RRPS-EQGPSCRVRSGPARFPPGAERCASRSPSR 371
RRPS + PS R R+ P R PP SRSP R
Sbjct: 308 RRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVR 341
>BC039600-1|AAH39600.1| 1049|Homo sapiens hect domain and RLD 4
protein.
Length = 1049
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +1
Query: 181 SYTAGRYPGHVDREHTEVSDGSGVVRGKFAYVDPRNKVR------AVEYVADQQGFHPVL 342
SY +GR+P + E SG + G F V + R V+ A + FH +
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470
Query: 343 SDVPPDHPADSESV 384
+ PDHP S+ V
Sbjct: 471 --IQPDHPQISQQV 482
>AY650033-1|AAV66579.1| 979|Homo sapiens HECT and RCC1 containing
protein 4 isoform 3 protein.
Length = 979
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +1
Query: 181 SYTAGRYPGHVDREHTEVSDGSGVVRGKFAYVDPRNKVR------AVEYVADQQGFHPVL 342
SY +GR+P + E SG + G F V + R V+ A + FH +
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470
Query: 343 SDVPPDHPADSESV 384
+ PDHP S+ V
Sbjct: 471 --IQPDHPQISQQV 482
>AY221963-1|AAO65480.1| 1057|Homo sapiens HECT and RCC1 containing
protein 4 isoform 1 protein.
Length = 1057
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +1
Query: 181 SYTAGRYPGHVDREHTEVSDGSGVVRGKFAYVDPRNKVR------AVEYVADQQGFHPVL 342
SY +GR+P + E SG + G F V + R V+ A + FH +
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470
Query: 343 SDVPPDHPADSESV 384
+ PDHP S+ V
Sbjct: 471 --IQPDHPQISQQV 482
>AL356741-3|CAH74148.1| 1049|Homo sapiens hect domain and RLD 4
protein.
Length = 1049
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +1
Query: 181 SYTAGRYPGHVDREHTEVSDGSGVVRGKFAYVDPRNKVR------AVEYVADQQGFHPVL 342
SY +GR+P + E SG + G F V + R V+ A + FH +
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470
Query: 343 SDVPPDHPADSESV 384
+ PDHP S+ V
Sbjct: 471 --IQPDHPQISQQV 482
>AL356741-1|CAH74146.1| 907|Homo sapiens hect domain and RLD 4
protein.
Length = 907
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +1
Query: 181 SYTAGRYPGHVDREHTEVSDGSGVVRGKFAYVDPRNKVR------AVEYVADQQGFHPVL 342
SY +GR+P + E SG + G F V + R V+ A + FH +
Sbjct: 262 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 320
Query: 343 SDVPPDHPADSESV 384
+ PDHP S+ V
Sbjct: 321 --IQPDHPQISQQV 332
>AL133551-3|CAI16032.1| 1049|Homo sapiens hect domain and RLD 4
protein.
Length = 1049
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +1
Query: 181 SYTAGRYPGHVDREHTEVSDGSGVVRGKFAYVDPRNKVR------AVEYVADQQGFHPVL 342
SY +GR+P + E SG + G F V + R V+ A + FH +
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470
Query: 343 SDVPPDHPADSESV 384
+ PDHP S+ V
Sbjct: 471 --IQPDHPQISQQV 482
>AL133551-1|CAI16031.1| 907|Homo sapiens hect domain and RLD 4
protein.
Length = 907
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +1
Query: 181 SYTAGRYPGHVDREHTEVSDGSGVVRGKFAYVDPRNKVR------AVEYVADQQGFHPVL 342
SY +GR+P + E SG + G F V + R V+ A + FH +
Sbjct: 262 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 320
Query: 343 SDVPPDHPADSESV 384
+ PDHP S+ V
Sbjct: 321 --IQPDHPQISQQV 332
>AB046813-1|BAB13419.1| 953|Homo sapiens KIAA1593 protein protein.
Length = 953
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +1
Query: 181 SYTAGRYPGHVDREHTEVSDGSGVVRGKFAYVDPRNKVR------AVEYVADQQGFHPVL 342
SY +GR+P + E SG + G F V + R V+ A + FH +
Sbjct: 308 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 366
Query: 343 SDVPPDHPADSESV 384
+ PDHP S+ V
Sbjct: 367 --IQPDHPQISQQV 378
>BC042482-1|AAH42482.1| 288|Homo sapiens KCTD7 protein protein.
Length = 288
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 172 YVFSYTAGRYPGHVDREHTEVSDGSGVVRGKFAYVDPRNKVRAVEYVADQQGFHPVLSDV 351
Y+ + + GRY +DR+ T D +R + PR +VRAV A P+L +
Sbjct: 86 YIPTDSEGRY--FIDRDGTHFGDVLNFLRS--GDLPPRERVRAVYKEAQYYAIGPLLEQL 141
Query: 352 PPDHPADSESV 384
P E V
Sbjct: 142 ENMQPLKGEKV 152
>BC035501-1|AAH35501.3| 415|Homo sapiens kazrin protein.
Length = 415
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 249 SCQRQVRIRRPSEQGPSCRVRSGPARFPPGAERC 350
S +R ++ E PSC +GPAR PPG C
Sbjct: 8 SWERVRQLAAQGEPAPSCGAGAGPAR-PPGPAAC 40
>AY505120-1|AAS86435.1| 415|Homo sapiens kazrin isoform B protein.
Length = 415
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 249 SCQRQVRIRRPSEQGPSCRVRSGPARFPPGAERC 350
S +R ++ E PSC +GPAR PPG C
Sbjct: 8 SWERVRQLAAQGEPAPSCGAGAGPAR-PPGPAAC 40
>AL391215-1|CAI13899.1| 415|Homo sapiens novel protein protein.
Length = 415
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 249 SCQRQVRIRRPSEQGPSCRVRSGPARFPPGAERC 350
S +R ++ E PSC +GPAR PPG C
Sbjct: 8 SWERVRQLAAQGEPAPSCGAGAGPAR-PPGPAAC 40
>AL035405-1|CAI19827.1| 415|Homo sapiens novel protein protein.
Length = 415
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 249 SCQRQVRIRRPSEQGPSCRVRSGPARFPPGAERC 350
S +R ++ E PSC +GPAR PPG C
Sbjct: 8 SWERVRQLAAQGEPAPSCGAGAGPAR-PPGPAAC 40
>AK056631-1|BAB71236.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32069 fis, clone OCBBF1000118, weakly similar to
TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN 1,
ENDOTHELIAL. ).
Length = 289
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 172 YVFSYTAGRYPGHVDREHTEVSDGSGVVRGKFAYVDPRNKVRAVEYVADQQGFHPVLSDV 351
Y+ + + GRY +DR+ T D +R + PR +VRAV A P+L +
Sbjct: 86 YIPTDSEGRY--FIDRDGTHFGDVLNFLRS--GDLPPRERVRAVYKEAQYYAIGPLLEQL 141
Query: 352 PPDHPADSESV 384
P E V
Sbjct: 142 ENMQPLKGEKV 152
>AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil domain
containing 1 protein.
Length = 1478
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = -3
Query: 299 ARTLF-RGSTYANLPLTTPEPSLT 231
+R LF R STY+ +P+T PE +LT
Sbjct: 1364 SRELFVRSSTYSLIPITVPEAALT 1387
>AF461089-1|AAQ04776.1| 566|Homo sapiens chondroitin sulfate
proteoglycan 5-III protein.
Length = 566
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 364 GDLEAHRSAPGGNLAGPLRTLQ 299
G+ EA +APGG LAGP LQ
Sbjct: 69 GEDEASWTAPGGELAGPEEVLQ 90
>AF461087-1|AAQ04774.1| 539|Homo sapiens chondroitin sulfate
proteoglycan 5-I protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 364 GDLEAHRSAPGGNLAGPLRTLQ 299
G+ EA +APGG LAGP LQ
Sbjct: 69 GEDEASWTAPGGELAGPEEVLQ 90
>AF059274-1|AAC69612.1| 539|Homo sapiens neuroglycan C protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 364 GDLEAHRSAPGGNLAGPLRTLQ 299
G+ EA +APGG LAGP LQ
Sbjct: 69 GEDEASWTAPGGELAGPEEVLQ 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,240,001
Number of Sequences: 237096
Number of extensions: 1197323
Number of successful extensions: 3472
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3472
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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