Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P02
         (317 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7AD8 Cluster: PREDICTED: similar to vegetable ...    33   0.93 
UniRef50_Q16RJ6 Cluster: Fkbp-rapamycin associated protein; n=1;...    31   3.8  
UniRef50_Q8I3B1 Cluster: Putative uncharacterized protein PFI018...    31   6.6  
UniRef50_Q9G4D9 Cluster: NADH dehydrogenase subunit 2; n=1; Thra...    30   8.7  
UniRef50_A5DCN9 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  

>UniRef50_UPI0000DB7AD8 Cluster: PREDICTED: similar to vegetable
           CG6657-PA, isoform A; n=1; Apis mellifera|Rep:
           PREDICTED: similar to vegetable CG6657-PA, isoform A -
           Apis mellifera
          Length = 409

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +1

Query: 46  YCYLLFKLVILNAIPFTMVNYNNFVYFCISN 138
           +C L+F  +I++ IPF ++   N+V FCI N
Sbjct: 218 FC-LIFNTIIISIIPFILLQIYNYVMFCIPN 247


>UniRef50_Q16RJ6 Cluster: Fkbp-rapamycin associated protein; n=1;
            Aedes aegypti|Rep: Fkbp-rapamycin associated protein -
            Aedes aegypti (Yellowfever mosquito)
          Length = 2151

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -3

Query: 189  YFIIFNPY*SGL*LLLAITNTKIYKIVIINHRKW 88
            YFI+F+     + +L  +  T+IYK++IIN +K+
Sbjct: 1027 YFILFSEELGWIVMLRVLFQTQIYKLIIINFKKY 1060


>UniRef50_Q8I3B1 Cluster: Putative uncharacterized protein PFI0185w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFI0185w - Plasmodium falciparum
            (isolate 3D7)
          Length = 1523

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = -1

Query: 272  LINLNNFYFLQSLNSTT-HVFNILDLVGHILSF----LIHIDLGSNY 147
            +IN N FYFL+ +N T  +  N      +I +F     IH+D G+ Y
Sbjct: 1143 IINRNEFYFLEVINGTVGNKINYTKTENNIYNFGMWIQIHLDFGNKY 1189


>UniRef50_Q9G4D9 Cluster: NADH dehydrogenase subunit 2; n=1;
           Thraustochytrium aureum|Rep: NADH dehydrogenase subunit
           2 - Thraustochytrium aureum
          Length = 500

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 255 FLFFTILKLNYTCF*YFRSCWPYFII 178
           F+F+ ++KL+Y+CF  F   W  F++
Sbjct: 261 FIFYVLVKLSYSCFFSFSFIWGPFLL 286


>UniRef50_A5DCN9 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 618

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 52  YLLFKLVILNAIPFTMVNYNNFVYFCISN 138
           Y+L  L+ +N++P     +NNFV F +SN
Sbjct: 310 YVLQYLISINSLPINRAVFNNFVRFGVSN 338


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,350,253
Number of Sequences: 1657284
Number of extensions: 4218982
Number of successful extensions: 7417
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7415
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)