Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P02
         (317 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119506-1|AAM50160.1|  704|Drosophila melanogaster GH12423p pro...    29   1.3  
AE014296-3274|AAF49073.2|  704|Drosophila melanogaster CG14186-P...    29   1.3  
AL121806-10|CAB58085.1|  692|Drosophila melanogaster EG:BACR42I1...    28   3.0  
AY089596-1|AAL90334.1|  484|Drosophila melanogaster RE19263p pro...    27   5.2  
AE014296-3416|AAF51639.2|  484|Drosophila melanogaster CG11396-P...    27   5.2  

>AY119506-1|AAM50160.1|  704|Drosophila melanogaster GH12423p
           protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 83  LFHLRWLIITILYIFVLVIASNS*SPDQ 166
           L   RWLIIT++Y+  +++A  S S D+
Sbjct: 608 LISFRWLIITMIYVATIILAICSDSIDE 635


>AE014296-3274|AAF49073.2|  704|Drosophila melanogaster CG14186-PA
           protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 83  LFHLRWLIITILYIFVLVIASNS*SPDQ 166
           L   RWLIIT++Y+  +++A  S S D+
Sbjct: 608 LISFRWLIITMIYVATIILAICSDSIDE 635


>AL121806-10|CAB58085.1|  692|Drosophila melanogaster EG:BACR42I17.9
           protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +3

Query: 3   TRIYSELFRQYHLSVLLSVI*ISDIECYSI 92
           T I S +FR +HL +L+S+  IS I C+++
Sbjct: 457 TTILSSMFRFFHLDILVSL--ISLISCFAL 484


>AY089596-1|AAL90334.1|  484|Drosophila melanogaster RE19263p
           protein.
          Length = 484

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 287 VNTE*LINLNNFYFLQSLNSTTHVFNILDLV 195
           +N   L+NL+  Y L+S NS    +N+L L+
Sbjct: 433 LNESLLVNLSTLYELESNNSKAKKYNLLRLI 463


>AE014296-3416|AAF51639.2|  484|Drosophila melanogaster CG11396-PA
           protein.
          Length = 484

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 287 VNTE*LINLNNFYFLQSLNSTTHVFNILDLV 195
           +N   L+NL+  Y L+S NS    +N+L L+
Sbjct: 433 LNESLLVNLSTLYELESNNSKAKKYNLLRLI 463


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,176,043
Number of Sequences: 53049
Number of extensions: 173142
Number of successful extensions: 297
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)