Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P01
         (278 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   0.61 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   1.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   5.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    19   9.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 0.61
 Identities = 19/74 (25%), Positives = 32/74 (43%)
 Frame = +1

Query: 40  IIQMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQK 219
           I+ +S  L    T  G  G  T + TN     +IL       ++V+  + DET   +   
Sbjct: 293 IVYVSLLLGPHPTYFGKTGRKTVLKTNKYCNFIILFYLSVFVILVYYASLDETPNPVTNG 352

Query: 220 RLYGHSHFISDVVL 261
           +LY  + F   ++L
Sbjct: 353 KLYNFNTFAKLLIL 366


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 51  HLYNPQ*AAHQPTRTSC 1
           HL NPQ   HQ  +  C
Sbjct: 261 HLVNPQSLNHQEVKAEC 277


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 5.7
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -1

Query: 275 FPSLDSTTSEMKW 237
           FP LDS  S   W
Sbjct: 270 FPKLDSLVSSRAW 282


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 82  CGHNGWIT 105
           CG  GW+T
Sbjct: 476 CGFAGWVT 483


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,877
Number of Sequences: 336
Number of extensions: 1178
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4684108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)