Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P01
         (278 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   0.94 
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       24   1.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   1.6  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   2.9  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   2.9  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             22   5.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   6.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    21   8.7  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 234 VTVQTLLWQAVAGFV 190
           V VQT LWQ +A F+
Sbjct: 21  VPVQTFLWQQIAPFI 35


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 241 NGSDRTDASVAGRSWFRL 188
           NG+ RTD S  G +W  L
Sbjct: 326 NGNTRTDDSAHGMTWIEL 343


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 83   QSVPLSFNVSLICII 39
            Q++P  FNV L+C+I
Sbjct: 1429 QAIPSIFNVLLVCLI 1443


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 88  HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETS 201
           H  W+   A+    P ++L++  D   I  +  R ETS
Sbjct: 181 HENWLIHGASPRPAPVLVLNADLDLNTIGAEYERSETS 218


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 88  HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETS 201
           H  W+   A+    P ++L++  D   I  +  R ETS
Sbjct: 182 HENWLIHGASPRPAPVLVLNADLDLNTIGAEYERSETS 219


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 145 SSSRDKTLIVWKLTRDETSYGLPQK 219
           S+S+D T+ VW    D T YG+  K
Sbjct: 132 STSKD-TVTVWTGVDDITQYGIIDK 155


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 264 GQYNVRNEMGVTVQT 220
           G Y ++NE G TV T
Sbjct: 190 GSYKLKNEHGQTVST 204


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 276 ISITGQYNVRNEMGVTVQTLLWQAVAG 196
           I  TG Y ++   G TV  L+   VAG
Sbjct: 58  IVATGSYPIQRVWGSTVPGLVAAKVAG 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,829
Number of Sequences: 2352
Number of extensions: 4703
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16604898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)