Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_P01
(278 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 83 2e-17
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 44 2e-05
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 44 2e-05
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 39 5e-04
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 39 5e-04
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 34 0.013
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 34 0.017
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 34 0.017
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 33 0.040
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 33 0.040
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 32 0.053
Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical pr... 32 0.070
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 31 0.12
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 31 0.12
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 31 0.16
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 31 0.16
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 31 0.16
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 31 0.16
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 31 0.16
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 30 0.21
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 0.37
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 0.37
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 29 0.49
Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical p... 29 0.49
Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical p... 29 0.49
U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical pr... 29 0.49
Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical p... 29 0.65
Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical p... 29 0.65
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 29 0.65
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 28 0.86
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 28 0.86
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 28 0.86
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 28 0.86
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 28 0.86
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 27 1.5
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 27 1.5
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 27 1.5
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 27 1.5
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 27 2.6
AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical ... 27 2.6
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 27 2.6
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 27 2.6
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 26 3.5
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 26 3.5
U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical pr... 26 3.5
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 26 3.5
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 26 3.5
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 26 3.5
AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine re... 26 3.5
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 26 4.6
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 26 4.6
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 26 4.6
U41993-8|AAA83449.1| 497|Caenorhabditis elegans Temporarily ass... 26 4.6
U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily ass... 26 4.6
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 26 4.6
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 26 4.6
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 26 4.6
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 25 6.1
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 25 6.1
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 25 6.1
Z81522-7|CAB04232.1| 297|Caenorhabditis elegans Hypothetical pr... 25 8.0
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 25 8.0
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 25 8.0
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 83.4 bits (197), Expect = 2e-17
Identities = 42/80 (52%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
Frame = +1
Query: 49 MSETLKLRGTLCGHNGWITQIATNPKYPDM-ILSSSRDKTLIVWKLTR----DETSYGLP 213
+ E +KL GTL GH GW+TQIAT + +LSSSRDKT++VW + DE G P
Sbjct: 2 VQEQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRP 61
Query: 214 QKRLYGHSHFISDVVLSSDG 273
+ L GH+HF+SDVV+SSDG
Sbjct: 62 VRSLTGHNHFVSDVVISSDG 81
Score = 30.3 bits (65), Expect = 0.21
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +1
Query: 76 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKRLYGHSHFISDV 255
+L GHN +++ + + LS S DKTL +W L + G+ ++ H+ + V
Sbjct: 64 SLTGHNHFVSDVVISSD-GQFALSGSWDKTLRLWDLNQ-----GVSTRQFISHTKDVLSV 117
Query: 256 VLSSD 270
S+D
Sbjct: 118 AFSAD 122
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +1
Query: 88 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 198
H +I QIA NP+ P+M +S S DKTL VWKL E+
Sbjct: 233 HAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQES 269
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 44.0 bits (99), Expect = 2e-05
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 70 RGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETS 201
R +L GH G + +A NP P M++S D T+ VW L R ET+
Sbjct: 558 RYSLVGHRGHVNAVAWNPADPTMLVSCGADATIRVWSLDRSETA 601
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 39.1 bits (87), Expect = 5e-04
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 76 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKRLYGHSHFISDV 255
TL H W+ +A +PK ++S + DKTL VW+L+ K + H HF+S V
Sbjct: 327 TLLAHENWVRGLAFHPK-GKYLISVADDKTLRVWELSAQRC-----MKAIEAHEHFVSTV 380
Score = 33.9 bits (74), Expect = 0.017
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +1
Query: 19 LVSCS----LGIIQMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 186
LVSCS + + +T +L GH ++ + P D +LS+SRD T+ W ++
Sbjct: 163 LVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPT-GDFVLSASRDHTIKQWDIS 221
Query: 187 RDETSYGLPQKRLYGHSHFISDVVLSSDG 273
T Y + R GH+ ++ + +S+DG
Sbjct: 222 ---TGYCVYTFR--GHNDWVRMIRISNDG 245
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 39.1 bits (87), Expect = 5e-04
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 76 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKRLYGHSHFISDV 255
TL H W+ +A +PK ++S + DKTL VW+L+ K + H HF+S V
Sbjct: 327 TLLAHENWVRGLAFHPK-GKYLISVADDKTLRVWELSAQRC-----MKAIEAHEHFVSTV 380
Score = 33.9 bits (74), Expect = 0.017
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +1
Query: 19 LVSCS----LGIIQMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 186
LVSCS + + +T +L GH ++ + P D +LS+SRD T+ W ++
Sbjct: 163 LVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPT-GDFVLSASRDHTIKQWDIS 221
Query: 187 RDETSYGLPQKRLYGHSHFISDVVLSSDG 273
T Y + R GH+ ++ + +S+DG
Sbjct: 222 ---TGYCVYTFR--GHNDWVRMIRISNDG 245
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 34.3 bits (75), Expect = 0.013
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGL 210
GH ++ QIA NPK + ++S DKT+ VW+ + ++ L
Sbjct: 140 GHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTL 181
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 33.9 bits (74), Expect = 0.017
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 22 VSCSLGIIQMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 189
V ++ + M K TL HN I Q++ +P Y ++ SS D +IVW +++
Sbjct: 285 VDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISK 340
Score = 28.3 bits (60), Expect = 0.86
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETS 201
GH G + + NP P I SS L VW+++ S
Sbjct: 365 GHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLVS 403
Score = 25.4 bits (53), Expect = 6.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 76 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
T GH + I NP ++ + S DKT+ +W +
Sbjct: 259 TAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDM 294
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 33.9 bits (74), Expect = 0.017
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 88 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKRLYGHSHFISDVVLSS 267
H+ IT AT+PK + I + SRD +L +W++ + G + L GH + ++ +S
Sbjct: 1334 HSDEITCFATSPKGGNFIATGSRDMSLKIWQIDK-----GFLTQVLVGHENVVTCCCISF 1388
Query: 268 D 270
D
Sbjct: 1389 D 1389
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.040
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 79 LCGHNGWITQIA-TNPKYPDMILSSSRDKTLIVW 177
L GH+G + +++ +PKY ++ S+S DK +I+W
Sbjct: 54 LVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIW 87
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 32.7 bits (71), Expect = 0.040
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 79 LCGHNGWITQIA-TNPKYPDMILSSSRDKTLIVW 177
L GH+G + +++ +PKY ++ S+S DK +I+W
Sbjct: 54 LVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIW 87
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 32.3 bits (70), Expect = 0.053
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 67 LRGTLCGH-NGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETS 201
++ + GH NGW+ + NP + +S S DKT +W + ++S
Sbjct: 358 VKQSFIGHQNGWVEAVKWNPLDTNQFVSVSTDKTAKMWDVRSSKSS 403
>Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical
protein F32H2.4 protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.070
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +1
Query: 88 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQK 219
H+ + Q+A + K P++ S+S D+ + VW + + + ++ + +
Sbjct: 46 HSSSVEQVACSEKQPNLFASASADRNICVWDIRQSKPTHRISNR 89
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 31.1 bits (67), Expect = 0.12
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 133 DMILSSSRDKTLIVWKLTRDETSYGLPQKRLYGHSHFISDVVLSSDG 273
D ++S D L VW + RDE +Y L GH I+ + LS G
Sbjct: 178 DQVISGGIDNVLKVWDMRRDEITY-----TLTGHRDTITGISLSPSG 219
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 31.1 bits (67), Expect = 0.12
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 13 RWLVSCSL-GIIQMSETLKLRGTLC--GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
R L SC G I + +T++ C GH +T + + +I S S+D+T+ +W+
Sbjct: 208 RLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGE--GLIYSGSQDRTVKMWRA 265
Query: 184 TRDETSYGLPQKRLYGHSHFISDVVLSSD 270
D+ G+ + + GH+H+I+ + L++D
Sbjct: 266 --DD---GVMCRNMTGHAHWINTLALNTD 289
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 30.7 bits (66), Expect = 0.16
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 79 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYG-LPQKRLY-GHSHFISD 252
L GH ++ NP +ILS+S D+T+ W + ++ G L K ++ GH + D
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVED 227
Query: 253 V 255
V
Sbjct: 228 V 228
Score = 29.1 bits (62), Expect = 0.49
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
GH I+ + NP P ++ S S D L VW++
Sbjct: 364 GHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 88 HNGWITQIATNPKYPDMILSS-SRDKTLIVWKL 183
H+ + +A NP Y + IL++ S DKT+ +W L
Sbjct: 264 HSAEVNCLAFNP-YSEFILATGSADKTVALWDL 295
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 30.7 bits (66), Expect = 0.16
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 79 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYG-LPQKRLY-GHSHFISD 252
L GH ++ NP +ILS+S D+T+ W + ++ G L K ++ GH + D
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVED 227
Query: 253 V 255
V
Sbjct: 228 V 228
Score = 29.1 bits (62), Expect = 0.49
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
GH I+ + NP P ++ S S D L VW++
Sbjct: 364 GHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 88 HNGWITQIATNPKYPDMILSS-SRDKTLIVWKL 183
H+ + +A NP Y + IL++ S DKT+ +W L
Sbjct: 264 HSAEVNCLAFNP-YSEFILATGSADKTVALWDL 295
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 30.7 bits (66), Expect = 0.16
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 79 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYG-LPQKRLY-GHSHFISD 252
L GH ++ NP +ILS+S D+T+ W + ++ G L K ++ GH + D
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVED 227
Query: 253 V 255
V
Sbjct: 228 V 228
Score = 29.1 bits (62), Expect = 0.49
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
GH I+ + NP P ++ S S D L VW++
Sbjct: 364 GHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 88 HNGWITQIATNPKYPDMILSS-SRDKTLIVWKL 183
H+ + +A NP Y + IL++ S DKT+ +W L
Sbjct: 264 HSAEVNCLAFNP-YSEFILATGSADKTVALWDL 295
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 30.7 bits (66), Expect = 0.16
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 73 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRD 192
GT G WI +A P Y D++ S S + L +WK++ +
Sbjct: 375 GTQNGSGRWIVALAVLP-YSDLLASGSNEGELKLWKISEN 413
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 30.7 bits (66), Expect = 0.16
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 73 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRD 192
GT G WI +A P Y D++ S S + L +WK++ +
Sbjct: 375 GTQNGSGRWIVALAVLP-YSDLLASGSNEGELKLWKISEN 413
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 30.3 bits (65), Expect = 0.21
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 76 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKRLYGHSHFISDV 255
+L GH + +A +P P + S +RD + +W L E Q L H ++D+
Sbjct: 61 SLDGHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASREC-----QATLDAHRGLVNDI 115
Query: 256 VLSSD 270
+ ++
Sbjct: 116 SIDNN 120
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 0.37
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 79 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE 195
L GH I ++ + Y ILSS D+T+ +W L+R+E
Sbjct: 713 LKGHTADILDVSWSKNY--FILSSGMDRTVKLWHLSRNE 749
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 0.37
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 79 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE 195
L GH I ++ + Y ILSS D+T+ +W L+R+E
Sbjct: 713 LKGHTADILDVSWSKNY--FILSSGMDRTVKLWHLSRNE 749
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 29.1 bits (62), Expect = 0.49
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT----RDETSYGLPQKRLYGHSHFISD 252
GH + + + ++ S S+D ++I W+L D S +P GH++ ++
Sbjct: 358 GHTESVLSVVSPTWDTSLLASCSKDNSIIFWRLVTSPENDSCSTLVPVAAATGHANTVTA 417
Query: 253 VVLSSDG 273
+ +S+ G
Sbjct: 418 LAISNTG 424
>Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 29.1 bits (62), Expect = 0.49
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 52 SETLKLRGTLC-GHNGWITQIATNPKYPDMILSSSRDKTLIVW 177
S + + +C GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 151 SSSFTFQTIVCPGHTLSVWALASFPDLPNTYLSASADKTIRMW 193
>Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 29.1 bits (62), Expect = 0.49
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 52 SETLKLRGTLC-GHNGWITQIATNPKYPDMILSSSRDKTLIVW 177
S + + +C GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 151 SSSFTFQTIVCPGHTLSVWALASFPDLPNTYLSASADKTIRMW 193
>U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical
protein C33H5.7 protein.
Length = 326
Score = 29.1 bits (62), Expect = 0.49
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
GH+ +T I +P DM LS + DKT+ +W L
Sbjct: 110 GHDKLVTGINVSPM-DDMFLSVAEDKTIRLWDL 141
>Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 28.7 bits (61), Expect = 0.65
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVW 177
GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 161 GHTLSVWALASFPDLPNTYLSASADKTIRMW 191
>Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 28.7 bits (61), Expect = 0.65
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVW 177
GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 161 GHTLSVWALASFPDLPNTYLSASADKTIRMW 191
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 28.7 bits (61), Expect = 0.65
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 189
GH ++ + +P D+ILS+S DK++ VW + +
Sbjct: 249 GHYNNVSSVIFHPN-ADLILSNSEDKSIRVWDMQK 282
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 79 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 186
L GHN ++ +P D++ S+S D+T+ VW ++
Sbjct: 133 LTGHNHYVMCAQFHPT-EDLVASASLDQTVRVWDIS 167
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 28.3 bits (60), Expect = 0.86
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 58 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 186
++K L GH+ IT + + + +++S+SRD T++VW L+
Sbjct: 574 SMKKLSVLNGHSDAITCLVSCQSHA-VLVSASRDLTVLVWHLS 615
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 28.3 bits (60), Expect = 0.86
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 73 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKR 222
G GH +T + + +LS+S+D+T+ VW L + G+ R
Sbjct: 312 GVFAGHRDGVTHVDSRQD-ERYLLSNSKDQTIKVWDLRKFSNMSGVEATR 360
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 28.3 bits (60), Expect = 0.86
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 73 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKR 222
G GH +T + + +LS+S+D+T+ VW L + G+ R
Sbjct: 353 GVFAGHRDGVTHVDSRQD-ERYLLSNSKDQTIKVWDLRKFSNMSGVEATR 401
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 28.3 bits (60), Expect = 0.86
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWK----LTRDETSYGL 210
GH+ W+ + ++L++S DKT I+WK L RD+ G+
Sbjct: 285 GHDDWVHSTVWSND-GRVLLTASSDKTCIIWKEIDNLWRDDVRLGI 329
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 7 CARWLVSCSLGIIQMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKT 165
C V S+ ++ + + + GH +TQIA NP +L+ SRD+T
Sbjct: 580 CKSSHVEHSVVMLWSTSNWSKKSEIIGHQLTVTQIAWNPS-GTRLLTVSRDRT 631
Score = 25.0 bits (52), Expect = 8.0
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 76 TLCGHNGWITQIATNPKYPD--MILSSSRDKTLIVWKL 183
++ GH WI IA N PD ++ S+ +D + +W +
Sbjct: 202 SVAGHTDWIHSIAFNDN-PDHLLVASAGQDTYVRLWAI 238
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 28.3 bits (60), Expect = 0.86
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 58 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 186
++K L GH+ IT + + + +++S+SRD T++VW L+
Sbjct: 574 SMKKLSVLNGHSDAITCLVSCQSHA-VLVSASRDLTVLVWHLS 615
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +1
Query: 88 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKRLYGHSHFISDVVLSS 267
H+G I + P+ I+S S D T+ W L ++++ + +GH + + +
Sbjct: 92 HDGAIMDVVGVPQKESQIVSISGDSTIRCWDL--NQSTLDRKSQVFFGHEGSVRSICFAP 149
Query: 268 D 270
D
Sbjct: 150 D 150
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
GH G + I P P++ ++ RD + +W +
Sbjct: 137 GHEGSVRSICFAPDDPNVFVTGGRDFQVKIWDM 169
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 27.5 bits (58), Expect = 1.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
GH G + I P+ +++ S D T+ +W +
Sbjct: 342 GHTGQVRAITVEPERGELLASGGEDGTVRIWMI 374
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 198
GH +T ++ N Y I+SSS D T+ +W L T
Sbjct: 363 GHQDSVTSVSFNTDY--RIVSSSDDATVKIWDLRNMRT 398
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 198
GH +T ++ N Y I+SSS D T+ +W L T
Sbjct: 361 GHQDSVTSVSFNTDY--RIVSSSDDATVKIWDLRNMRT 396
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +1
Query: 73 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 198
G + H + +++ + SRD+ + +WKL+RD +
Sbjct: 74 GIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHS 115
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 26.6 bits (56), Expect = 2.6
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQK 219
GH + +A N ++ S DKT+++W L + + +P +
Sbjct: 244 GHTDAVISLAWNRITTHVLASGGADKTVVLWDLDEAKPAQIIPDQ 288
>AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical
protein Y18D10A.9 protein.
Length = 337
Score = 26.6 bits (56), Expect = 2.6
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 118 NPKYPDMILSSSRDKTLIVWKL 183
NPK+ +++ S+S D T+ +W+L
Sbjct: 314 NPKFSNLLTSASDDGTIRLWEL 335
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +1
Query: 73 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 198
G + H + +++ + SRD+ + +WKL+RD +
Sbjct: 74 GIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHS 115
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +1
Query: 73 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 198
G + H + +++ + SRD+ + +WKL+RD +
Sbjct: 74 GIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHS 115
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 101 IQPLWPQSVPLSFNVSLICIIPSEQLTS 18
I+ LW + PL V L +PS QLT+
Sbjct: 219 IEYLWKEHSPLQLKVGLSSSLPSFQLTN 246
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 118 NPKYPDMILSSSRDKTLIVWKL 183
NP +PD +SS D++++V K+
Sbjct: 164 NPAFPDTFAASSTDRSILVAKI 185
>U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical
protein C33H5.6 protein.
Length = 248
Score = 26.2 bits (55), Expect = 3.5
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 85 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKRLYGHSHFIS 249
GH + I TNPK + LSSS D + ++ TR +YG L GH+ I+
Sbjct: 109 GHRMPVNFIRTNPKDREKFLSSSVDGEIRMFD-TRTFENYGC---LLAGHTPLIA 159
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 61 LKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
+ +R L GH + + + +Y I+S+S D+T+ VW +
Sbjct: 335 ITIRRVLVGHRAAVNVVDFDDRY---IVSASGDRTIKVWSM 372
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 101 IQPLWPQSVPLSFNVSLICIIPSEQLTS 18
I+ LW + PL V L +PS QLT+
Sbjct: 219 IEYLWKEHSPLQLKVGLSSSLPSFQLTN 246
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 61 LKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
+ +R L GH + + + +Y I+S+S D+T+ VW +
Sbjct: 335 ITIRRVLVGHRAAVNVVDFDDRY---IVSASGDRTIKVWSM 372
>AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine
receptor, class sx protein11 protein.
Length = 310
Score = 26.2 bits (55), Expect = 3.5
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +1
Query: 16 WLVSCSLGII--QMSETLKLRGTLCGHNGWITQIA-TNPKYPDMILSSS-RDKTLIVWKL 183
W S G+I QM+E +L HN +T +A +N Y M S R + VW
Sbjct: 217 WFFSQIFGLIILQMTEYTAFEASLFAHNSLLTSLAYSNTFYVTMWRSKEYRKQFYSVWWP 276
Query: 184 TRDETS 201
+ +TS
Sbjct: 277 KKVQTS 282
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 25.8 bits (54), Expect = 4.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 217 KRLYGHSHFISDVVLSSDGN 276
K + GHS +I+DV S +GN
Sbjct: 343 KEMRGHSSYITDVRYSDEGN 362
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/49 (24%), Positives = 18/49 (36%)
Frame = +1
Query: 64 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGL 210
KL GH GW+ + P S D+ + +W L + L
Sbjct: 175 KLYRVASGHTGWVRAVDVEPG-NQWFASGGADRIIKIWDLASGQLKLSL 222
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/49 (24%), Positives = 18/49 (36%)
Frame = +1
Query: 64 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGL 210
KL GH GW+ + P S D+ + +W L + L
Sbjct: 175 KLYRVASGHTGWVRAVDVEPG-NQWFASGGADRIIKIWDLASGQLKLSL 222
>U41993-8|AAA83449.1| 497|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform a protein.
Length = 497
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 95 PLWPQSVPLSFNVSLICIIPSEQLTSQRAHR 3
P W Q VP ++ + +IP E L R R
Sbjct: 350 PAWEQKVPDAYQKMVSAMIPKEMLWGPREDR 380
>U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform b protein.
Length = 733
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 95 PLWPQSVPLSFNVSLICIIPSEQLTSQRAHR 3
P W Q VP ++ + +IP E L R R
Sbjct: 586 PAWEQKVPDAYQKMVSAMIPKEMLWGPREDR 616
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 25.8 bits (54), Expect = 4.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 217 KRLYGHSHFISDVVLSSDGN 276
K + GHS +I+DV S +GN
Sbjct: 343 KEMRGHSSYITDVRYSDEGN 362
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 64 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 183
KL T GHN + + PK + LS S D + +W++
Sbjct: 266 KLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEV 305
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 25.8 bits (54), Expect = 4.6
Identities = 18/75 (24%), Positives = 33/75 (44%)
Frame = +1
Query: 25 SCSLGIIQMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSY 204
+C L + + T +L ++ GH I + T + + +S S+DKT+ W L +
Sbjct: 486 NCHLNVTDCN-TGQLIQSMKGHTAPILGLYTWSQAGNQFVSCSQDKTIRFWDLRQQTAVN 544
Query: 205 GLPQKRLYGHSHFIS 249
+ HS F +
Sbjct: 545 VISPGSNKSHSEFFN 559
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/45 (22%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 HNGWITQIA-TNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQK 219
H G + ++ +P++ ++ + S D+T+++W+ + L QK
Sbjct: 61 HGGAVWRVIWAHPEFGQIVATCSYDRTIVIWEEQIVRSEKDLKQK 105
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 25.4 bits (53), Expect = 6.1
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 25 SCSLGIIQMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETS 201
+C L + + T +L ++ GH I + T + + +S S+DKT+ W L R +T+
Sbjct: 752 NCHLNVTDCN-TGQLIQSMKGHTAPILGLYTWSQAGNQFVSCSQDKTIRFWDL-RQQTA 808
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 25.4 bits (53), Expect = 6.1
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 25 SCSLGIIQMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETS 201
+C L + + T +L ++ GH I + T + + +S S+DKT+ W L R +T+
Sbjct: 752 NCHLNVTDCN-TGQLIQSMKGHTAPILGLYTWSQAGNQFVSCSQDKTIRFWDL-RQQTA 808
>Z81522-7|CAB04232.1| 297|Caenorhabditis elegans Hypothetical
protein F32B4.6 protein.
Length = 297
Score = 25.0 bits (52), Expect = 8.0
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 100 ITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKR 222
+TQ+AT P+Y SSR K+LIV D + G P KR
Sbjct: 120 VTQLATTPEY------SSRIKSLIV----EDMSPLGYPLKR 150
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 25.0 bits (52), Expect = 8.0
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +1
Query: 121 PKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKRLYGHSHFISDVVLSSDG 273
P + + I+++S T+ VW T + L + R + + S + +DG
Sbjct: 502 PNFQNTIVTASTSGTISVWDYTEKDVREDLERSRNWQEAEIRSISNIQADG 552
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 43 IQMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETSYGLPQKR 222
+ M++ L L LCG+N I + +P ++ SS+ +I + R G+P K+
Sbjct: 294 LHMTKKLSLNEALCGYNFLIKHLDGHP-----LVLSSKQGDVIKPGVIRGVLGKGMPNKK 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,236,515
Number of Sequences: 27780
Number of extensions: 106287
Number of successful extensions: 353
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 248937694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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