Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_P01
         (278 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   2.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   3.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   4.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   6.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   6.5  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            19   8.6  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 164 LLSCGN*LETKPATACHRSVCT 229
           L+ CG   +T+  T   R  CT
Sbjct: 115 LMCCGRGYKTQEVTVVERCACT 136


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 181 LTRDETSYGLPQKRLYGHSHFISDVVLSSDG 273
           LT+   ++G+P   L+  +H +       DG
Sbjct: 430 LTKASATFGIPSTTLWQRAHRLGIDTPKKDG 460



 Score = 19.8 bits (39), Expect = 6.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 187 RDETSYGLPQKRLYG 231
           R  T +G+P   LYG
Sbjct: 541 RASTEFGIPTGTLYG 555


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 274 FHHWTVQR 251
           F+HWTV R
Sbjct: 304 FNHWTVMR 311


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 152  HEIKLLSCGN 181
            HE+K L CGN
Sbjct: 1460 HELKGLLCGN 1469


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 152  HEIKLLSCGN 181
            HE+K L CGN
Sbjct: 1456 HELKGLLCGN 1465


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 97  WITQIATNPKYPDMI 141
           WIT+  T  ++ DM+
Sbjct: 87  WITRSGTREQFIDMV 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,182
Number of Sequences: 438
Number of extensions: 1317
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5369883
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)