Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_O23
         (195 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    19   7.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           19   7.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    19   7.1  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              18   9.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    18   9.4  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 135 RFSDTDVQAEFSDMKIPH 82
           +F   +V  E+SD+  PH
Sbjct: 28  KFLGWNVPPEYSDLVRPH 45


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 66  VFRSLLLLFIFFK 28
           VFR  LL++ FFK
Sbjct: 330 VFRYGLLIYDFFK 342


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 135 RFSDTDVQAEFSDMKIPH 82
           +F   +V  E+SD+  PH
Sbjct: 28  KFLGWNVPPEYSDLVHPH 45


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +1

Query: 118 ICVGESG 138
           ICVGE+G
Sbjct: 32  ICVGETG 38


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 133 SGDRLTRAAKVLEQLTGQPP 192
           S D  +    + E LTG PP
Sbjct: 545 SADYWSLGVLMFELLTGTPP 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,288
Number of Sequences: 438
Number of extensions: 661
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2541420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)