Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O21
(395 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 29 1.0
05_01_0534 - 4601844-4602297,4602689-4602847,4602947-4603514,460... 29 1.0
08_01_0202 - 1638978-1639571 29 1.4
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 29 1.4
06_03_1310 + 29238644-29240260 29 1.4
06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186... 29 1.4
08_02_1004 - 23461798-23462024,23462340-23462415,23463479-234636... 29 1.8
07_03_1284 + 25463476-25463557,25465088-25465220,25465307-254653... 29 1.8
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 29 1.8
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 2.4
10_01_0052 - 750902-751697,753077-753603,753696-753913,754012-75... 28 2.4
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 28 2.4
02_01_0054 - 404464-405152,406087-406618 28 2.4
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 3.1
03_01_0455 + 3487354-3488090,3489172-3489255,3489942-3490554,349... 28 3.1
01_05_0602 + 23577328-23579805 28 3.1
09_04_0663 + 19299275-19299479,19300842-19300948,19301222-193014... 27 4.1
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 27 4.1
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 27 4.1
02_01_0674 + 5020118-5020202,5020301-5020436,5021075-5021140,502... 27 4.1
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 27 5.5
10_08_1037 - 22477358-22478752 27 5.5
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241... 27 5.5
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 27 5.5
05_07_0282 + 28934359-28936458 27 5.5
05_04_0146 + 18393447-18394043 27 5.5
01_05_0759 + 24963621-24963902,24963955-24964719 27 5.5
12_02_1174 - 26696869-26698191 27 7.2
12_02_0640 - 21447470-21448309 27 7.2
12_02_0635 - 21430245-21431156 27 7.2
10_08_0115 + 14924463-14924939 27 7.2
06_01_0351 + 2537022-2538281 27 7.2
05_06_0271 + 26836396-26836610,26836793-26836872,26837573-268376... 27 7.2
05_03_0509 + 14858250-14858545,14859139-14859243,14859345-14859912 27 7.2
01_01_0929 - 7344911-7345978 23 8.4
12_02_0643 - 21461123-21461902 26 9.6
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 26 9.6
05_06_0180 + 26173452-26173692,26174456-26174698,26174796-261750... 26 9.6
03_01_0483 + 3689155-3689814 26 9.6
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 26 9.6
01_06_0637 + 30763657-30763858,30765600-30766261 26 9.6
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 144 TVPLSPLVRPDRTRLPPTCSPPPQRSR 64
T P +PL P ++R PPT PPP +R
Sbjct: 587 TPPQAPLPAPSKSRAPPT--PPPAHTR 611
>05_01_0534 -
4601844-4602297,4602689-4602847,4602947-4603514,
4604853-4605246
Length = 524
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 38 VGGSNEA--RTRLLCGGGEQVGGSRVRSGLTRGDNG 139
VGG + R R++ GGGEQ GG+ V D G
Sbjct: 9 VGGEKKGDQRVRVMEGGGEQAGGAAVGGAAAAPDGG 44
>08_01_0202 - 1638978-1639571
Length = 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +2
Query: 32 FFVGGSNEARTRLLC----GGGEQVGGSRVRSGLTRGDNG 139
F VG N+ RT+ + GGG GGSR G RG G
Sbjct: 54 FSVGSGNDGRTKAVDVTAPGGGALTGGSRPSGGGDRGYGG 93
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 129 PLVRPDRTRLPPTCSPPPQRSRVRASLLPPTKKYYY 22
P P +TR PP SPPPQ+ + R PP + YY
Sbjct: 71 PAPTPPQTR-PP--SPPPQQQQPRPVSPPPVAEPYY 103
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -3
Query: 189 AQSQFEIKNSRRCNNTVPLSPLVRPDRTRLPPTCSP--PPQRSRVRASLLPPTKKYY 25
AQ Q +RR PL+P P +PP +P PP S S LPP Y
Sbjct: 360 AQCQATPPTTRRPGGRTPLAPHRSPLPHHMPPRRTPPTPPPPSSPTPSHLPPPPPTY 416
>06_03_0927 +
26015956-26018230,26018323-26018471,26018550-26018618,
26018701-26018853,26018927-26019090,26019207-26019354,
26020348-26020470,26020560-26020647,26020781-26020950
Length = 1112
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -3
Query: 141 VPLSPLVRPDRTRLPPTCSPPPQRSRVRASL--LPPTKKYYYN 19
VP+ P R PP +P P+ +R R L LPP + N
Sbjct: 221 VPVKPQEIAAEVRAPPQANPQPEAARYRQPLSQLPPLPPVFMN 263
>08_02_1004 -
23461798-23462024,23462340-23462415,23463479-23463610,
23463927-23464004,23464919-23465320
Length = 304
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Frame = -3
Query: 96 PTCSPPPQRSRVRA---SLLPP 40
PTC PPP R+ + A SLLPP
Sbjct: 2 PTCLPPPPRAAIAAVLTSLLPP 23
>07_03_1284 +
25463476-25463557,25465088-25465220,25465307-25465378,
25465476-25465544,25465629-25465700,25465792-25465860,
25466155-25466220,25466299-25466364,25466452-25466786,
25466931-25467214,25467796-25468067,25468152-25468287,
25468625-25468755,25468890-25469046,25469185-25469327,
25470105-25470190,25471530-25472962,25474563-25474712,
25475221-25475322,25475467-25475568
Length = 1319
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 231 LTQVSSADNTNSHWAQSQFE-IKNSRRCNNTVPLSPLVRPDRTRLPPTCSPPPQRSRVRA 55
LT ++ A+N + W + + IKN + N+ P P + PP SPP + + R
Sbjct: 185 LTDLNVANNQFTGWIPDKLKKIKNLQTNGNSFGSGPSPPPPPYQSPPYKSPPYKSPQSRQ 244
Query: 54 SLLPPT 37
PPT
Sbjct: 245 P-APPT 249
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 159 RRCNNTVPLSPLVRPDRTRLPPTCSPPPQRSRVRAS 52
RR T +P+ R PPT SPP R R AS
Sbjct: 480 RRTAPTFAATPVARAMALTAPPTSSPPGSRLRCTAS 515
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -3
Query: 129 PLVRPDRTRLPPTCSPP-PQRSRVRASLLPPT 37
P P RT L PTC PP P RV + PT
Sbjct: 50 PTESPTRTSLGPTCHPPFPIPVRVTETATDPT 81
>10_01_0052 -
750902-751697,753077-753603,753696-753913,754012-754114,
754337-754393
Length = 566
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 333 LILN*STYQ*NI*RIKIYEGITCSGVATGCV 241
L LN S Y NI R +Y G+ + V +GC+
Sbjct: 138 LFLNSSYYNWNICRATVYTGLYLTAVGSGCM 168
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = -3
Query: 276 GITCSGVATGCVGDALTQVSSADNTNSHWAQSQFEIKNSRRCNNTVPLSPLVRPDRTRLP 97
G CSGVATG G A +V A A ++F ++ + V P R +
Sbjct: 714 GSVCSGVATGMEGMA-GRVLCAGMAAVTGAMAEFADASADGYDALVSAVAAGAPGRRKEE 772
Query: 96 PTCSP 82
PTC P
Sbjct: 773 PTCGP 777
>02_01_0054 - 404464-405152,406087-406618
Length = 406
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
Frame = -3
Query: 105 RLPPTCSPPPQRS----RVRASLLPPTKK 31
+L P CSPPPQ+ R A L+P TK+
Sbjct: 59 QLMPPCSPPPQQELPLLRPAAKLVPSTKE 87
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 102 LPPTCSPPPQRSRVRASLLPPT 37
L PT +PPP S +SL PPT
Sbjct: 80 LAPTPTPPPPSSTASSSLPPPT 101
>03_01_0455 +
3487354-3488090,3489172-3489255,3489942-3490554,
3491356-3491583,3492270-3492437,3492828-3494587,
3494667-3494670
Length = 1197
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 108 TRLPPTCSPPPQRSRVRASLLPPTKKYY 25
T PP + P QR +A+ P T++YY
Sbjct: 50 TSTPPAAATPLQRPPAQATAQPSTQRYY 77
>01_05_0602 + 23577328-23579805
Length = 825
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 129 PLVRPDRTRLPPTCSPPPQRSRVRAS 52
PL+ RLPP+ PPP SR+ A+
Sbjct: 13 PLLSRSHRRLPPSPPPPPLPSRLAAA 38
>09_04_0663 +
19299275-19299479,19300842-19300948,19301222-19301413,
19301933-19302043,19302374-19302673
Length = 304
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 96 PTCSPPPQRSRVRASLLPP 40
P CSPPP+ R RA PP
Sbjct: 12 PRCSPPPRPRRCRARPPPP 30
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -3
Query: 219 SSADNTNSHWAQSQFEIKNSRRCNNTVPLSPLVRPDRTRLPPTCSPPP 76
S A NS + S ++ C++ S P+ ++LPP PPP
Sbjct: 265 SRASPANSSSSSSSSSAPSTPSCSSDTAASRSRLPELSKLPPIPPPPP 312
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -3
Query: 111 RTRLPPTCSPPPQRSRVRASLLPP 40
RT PPT SPPP SR R PP
Sbjct: 6 RTWPPPTPSPPPFSSRPRVVGPPP 29
>02_01_0674 +
5020118-5020202,5020301-5020436,5021075-5021140,
5021219-5021290,5021362-5021433,5024242-5024301,
5024494-5024565,5024655-5024720,5024798-5024863,
5024945-5025273,5025713-5025969,5026213-5026484,
5026580-5026715,5026833-5026972,5027051-5027207,
5027476-5027634
Length = 714
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 240 GDALTQVSSADNTNSHWAQSQFE-IKNSRRCNNTVPLSPLVRPDRTRLPPTCSPPPQRSR 64
G +LT ++ A+N + W +F I + N+ P P PP PPP+R R
Sbjct: 204 GLSLTTLNIANNNFNGWIPQEFSSIPDLTLGGNSFTNGPAPPP-----PPFMPPPPRRPR 258
Query: 63 VRAS 52
R S
Sbjct: 259 NRPS 262
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 55 GADATPLWRRGAGGRESRSVRPHER**RYCVVTSPRV 165
GA +T WR GAG R+ R R R V T+ R+
Sbjct: 138 GASSTHAWRPGAGRRKGRRRAARRRSGRKDVTTAGRL 174
>10_08_1037 - 22477358-22478752
Length = 464
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 126 LVRPDRTRLPPTCSPPPQRSRV 61
L P R PP CSPPP S V
Sbjct: 147 LASPPRPIAPPCCSPPPIPSPV 168
>10_08_0765 - 20421813-20423174,20423591-20423771,20423862-20424117,
20424768-20425095,20425218-20426156,20427015-20427761,
20428517-20428789
Length = 1361
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/52 (21%), Positives = 27/52 (51%)
Frame = -3
Query: 210 DNTNSHWAQSQFEIKNSRRCNNTVPLSPLVRPDRTRLPPTCSPPPQRSRVRA 55
+ TN+HW + +++N+ CN V + ++ + + SP +++R+
Sbjct: 1140 ERTNNHWMEEPHQVQNA-TCNMPVTMQQGMKRNWCEAEASDSPQQVNAKIRS 1190
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = -3
Query: 201 NSHWAQSQFEIKNSRRCNNTVPLSPLVRPDRTRLPPTCSPPPQRSRVRASLLPP 40
NS Q+ E+ + + + PL P + LPP PP ++ +L P
Sbjct: 324 NSSEMQNANEVPGLKEDDKVTRILPLPPPQPSHLPPLPPRPPTMPSMQPDMLAP 377
>05_07_0282 + 28934359-28936458
Length = 699
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 135 LSPLVRPDRTRLPPTCSPPPQRSRVRASLLPP 40
L P + + + TC+ PPQ+SR ++ PP
Sbjct: 629 LKPSSKITASSMSVTCAGPPQKSRSMGTVRPP 660
>05_04_0146 + 18393447-18394043
Length = 198
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = -3
Query: 261 GVATGCVGDALTQVSSADNTNSHWAQSQFEIKNSRRCNNTVPLSPLVRPDRTRLPPTCSP 82
G T C+ A + + T+S A F +T L+ RP + LPP+ SP
Sbjct: 32 GRLTSCITAASSSARAGSGTDSA-AGGLFTSAEDGN-GDTTALTEQPRPPAS-LPPSASP 88
Query: 81 PPQRSRVRASL 49
PP A++
Sbjct: 89 PPPEREAAAAM 99
>01_05_0759 + 24963621-24963902,24963955-24964719
Length = 348
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 112 PNATPSHLLPSSTEESRPRLITPSYE 35
PNA HLL + E R R PS+E
Sbjct: 224 PNAVTGHLLEQAAERKRRRQHLPSHE 249
>12_02_1174 - 26696869-26698191
Length = 440
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 141 VPLSPLVRPDRTRLPPTCSPPPQRSRVRASLLPP 40
VP P RTR+ P PPP + + SL PP
Sbjct: 122 VPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPP 155
>12_02_0640 - 21447470-21448309
Length = 279
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 138 PLSPLVRPDRTRLPPTCSPPPQRSRVRASLLPP 40
P + +P +R PP +PPP+R R S PP
Sbjct: 194 PTTKKKKPQSSRRPPARTPPPER---RESPSPP 223
>12_02_0635 - 21430245-21431156
Length = 303
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 138 PLSPLVRPDRTRLPPTCSPPPQRSRVRASLLPP 40
P + +P +R PP +PPP+R R S PP
Sbjct: 191 PTTKKKKPQSSRRPPARTPPPER---RESPSPP 220
>10_08_0115 + 14924463-14924939
Length = 158
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 144 TVPLSPLVRPDRTRLPPTCSPPPQRSRVRASLLPP 40
T P + D PP PPP ++ A +LPP
Sbjct: 90 TPPPEDVAGDDMIDAPPPPPPPPMEVQLGADVLPP 124
>06_01_0351 + 2537022-2538281
Length = 419
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 114 DRTRLPPTCSPPPQRSRVRASLLPP 40
DR RL C P +RV LLPP
Sbjct: 64 DRVRLRAVCRPWRSSARVELDLLPP 88
>05_06_0271 +
26836396-26836610,26836793-26836872,26837573-26837641,
26837694-26837985,26838303-26838399,26838478-26838744,
26838832-26838909,26839019-26839120,26839251-26839300,
26839383-26839482,26839645-26839743,26839840-26839968,
26840319-26840427,26840652-26841055,26841140-26841280,
26841373-26841393
Length = 750
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 54 RRGRDSSVEEGSRWEGVAFGPASREVIT 137
R+G D S E GS E A ASR +IT
Sbjct: 484 RKGSDGSAESGSEVEDGASPMASRNLIT 511
>05_03_0509 + 14858250-14858545,14859139-14859243,14859345-14859912
Length = 322
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 41 GGSNEARTRLLCGGGEQVGGSRVRSGLTRGDN 136
G +E ++ + CGGG GG R R N
Sbjct: 64 GEGSEVQSEVTCGGGASAGGKRKAPAADRKAN 95
>01_01_0929 - 7344911-7345978
Length = 355
Score = 22.6 bits (46), Expect(2) = 8.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 102 LPPTCSPPP 76
LPP C PPP
Sbjct: 53 LPPPCPPPP 61
Score = 22.2 bits (45), Expect(2) = 8.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 144 TVPLSPLVRPDRTRLPPTCSPP 79
T PL P P +TR PP PP
Sbjct: 19 TPPLPPSP-PSKTRRPPPPPPP 39
>12_02_0643 - 21461123-21461902
Length = 259
Score = 26.2 bits (55), Expect = 9.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 138 PLSPLVRPDRTRLPPTCSPPPQR 70
P + +P +R PP+ +PPP+R
Sbjct: 186 PTTKKKKPQSSRRPPSRTPPPER 208
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = -3
Query: 141 VPLSPLVRPDRTRLPPTCSPPPQRSRVRASLLPPTKKYYYNTT 13
+ + P + P +PP+ P P+ + + L P ++Y N T
Sbjct: 100 IAVPPALPPIPAIVPPSLPPTPEANLPCVAELAPCSEFYRNAT 142
>05_06_0180 +
26173452-26173692,26174456-26174698,26174796-26175009,
26175115-26175194,26175381-26175502,26175950-26176053,
26176457-26176644,26176725-26176924,26177104-26177331
Length = 539
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 99 PPTCSPPPQRSRVRASLLPPTKK 31
PPT S P ++ R+ + PP+KK
Sbjct: 482 PPTASEPSRKLRLGSRKAPPSKK 504
>03_01_0483 + 3689155-3689814
Length = 219
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 41 GGSNEARTRLLCGGGEQVGGSRVRSGLTRGDNG 139
GGSN AR GG + V GS S RGD G
Sbjct: 55 GGSNAARGD---GGADPVRGSAGGSDAARGDGG 84
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 41 GGSNEARTRLLCGGGEQVGGSRVRSGLTRGDNGTVLLH 154
GGS+ + L GGG GG + G + G +L++
Sbjct: 824 GGSSMVHSDLYGGGGGSGGGPHILGGSSYGVQAIILIY 861
>01_06_0637 + 30763657-30763858,30765600-30766261
Length = 287
Score = 26.2 bits (55), Expect = 9.6
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 178 IRDQKLEAM*QHSTVITSR--EAGPNATPSHLLPSSTEESRPR 56
+ D L+ + STV S E GPN PSHL PS + P+
Sbjct: 2 VADPPLQKVTLGSTVHGSALLEDGPNPLPSHLSPSPSLLPSPK 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,036,341
Number of Sequences: 37544
Number of extensions: 237219
Number of successful extensions: 1257
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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