Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O20
(549 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D32053-1|BAA22084.1| 597|Homo sapiens Lysyl tRNA Synthetase pro... 175 1e-43
D31890-1|BAA06688.1| 601|Homo sapiens KIAA0070 protein. 175 1e-43
BC004132-1|AAH04132.1| 597|Homo sapiens lysyl-tRNA synthetase p... 175 1e-43
AF285758-1|AAG30114.1| 625|Homo sapiens lysyl-tRNA synthetase p... 165 1e-40
AK126584-1|BAC86604.1| 423|Homo sapiens protein ( Homo sapiens ... 49 1e-05
>D32053-1|BAA22084.1| 597|Homo sapiens Lysyl tRNA Synthetase
protein.
Length = 597
Score = 175 bits (425), Expect = 1e-43
Identities = 97/185 (52%), Positives = 120/185 (64%), Gaps = 11/185 (5%)
Frame = +1
Query: 28 IMAETSSEKVSKNELKRRLKAEQKLKEK-------SEKAAQQPVQP----TTXXXXXXXX 174
+ + S K+SKNELKRRLKAE+K+ EK SEK Q TT
Sbjct: 9 VKVDGSEPKLSKNELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNGVGPEE 68
Query: 175 XXXXPNEYYKLRSTAVAALKKGSKEEHPYPHKFNVTISLEEFISKYNSLNSGEVLENITV 354
PN+YYK+RS A+ LK E PYPHKF+V ISL +FI KY+ L G+ L +IT+
Sbjct: 69 ESVDPNQYYKIRSQAIHQLKVNG--EDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITL 126
Query: 355 SVAGRVHSIRESGAKLIFYDLRAEGVKIQVMANAKLYESEEKFETDTDKLRRGDIIGCIG 534
VAGR+H+ R SG KLIFYDLR EGVK+QVMAN++ Y+SEE+F +KLRRGDIIG G
Sbjct: 127 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQG 186
Query: 535 HPGKT 549
+PGKT
Sbjct: 187 NPGKT 191
>D31890-1|BAA06688.1| 601|Homo sapiens KIAA0070 protein.
Length = 601
Score = 175 bits (425), Expect = 1e-43
Identities = 97/185 (52%), Positives = 120/185 (64%), Gaps = 11/185 (5%)
Frame = +1
Query: 28 IMAETSSEKVSKNELKRRLKAEQKLKEK-------SEKAAQQPVQP----TTXXXXXXXX 174
+ + S K+SKNELKRRLKAE+K+ EK SEK Q TT
Sbjct: 13 VKVDGSEPKLSKNELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNGVGPEE 72
Query: 175 XXXXPNEYYKLRSTAVAALKKGSKEEHPYPHKFNVTISLEEFISKYNSLNSGEVLENITV 354
PN+YYK+RS A+ LK E PYPHKF+V ISL +FI KY+ L G+ L +IT+
Sbjct: 73 ESVDPNQYYKIRSQAIHQLKVNG--EDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITL 130
Query: 355 SVAGRVHSIRESGAKLIFYDLRAEGVKIQVMANAKLYESEEKFETDTDKLRRGDIIGCIG 534
VAGR+H+ R SG KLIFYDLR EGVK+QVMAN++ Y+SEE+F +KLRRGDIIG G
Sbjct: 131 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQG 190
Query: 535 HPGKT 549
+PGKT
Sbjct: 191 NPGKT 195
>BC004132-1|AAH04132.1| 597|Homo sapiens lysyl-tRNA synthetase
protein.
Length = 597
Score = 175 bits (425), Expect = 1e-43
Identities = 97/185 (52%), Positives = 120/185 (64%), Gaps = 11/185 (5%)
Frame = +1
Query: 28 IMAETSSEKVSKNELKRRLKAEQKLKEK-------SEKAAQQPVQP----TTXXXXXXXX 174
+ + S K+SKNELKRRLKAE+K+ EK SEK Q TT
Sbjct: 9 VKVDGSEPKLSKNELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNGVGPEE 68
Query: 175 XXXXPNEYYKLRSTAVAALKKGSKEEHPYPHKFNVTISLEEFISKYNSLNSGEVLENITV 354
PN+YYK+RS A+ LK E PYPHKF+V ISL +FI KY+ L G+ L +IT+
Sbjct: 69 ESVDPNQYYKIRSQAIHQLKVNG--EDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITL 126
Query: 355 SVAGRVHSIRESGAKLIFYDLRAEGVKIQVMANAKLYESEEKFETDTDKLRRGDIIGCIG 534
VAGR+H+ R SG KLIFYDLR EGVK+QVMAN++ Y+SEE+F +KLRRGDIIG G
Sbjct: 127 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQG 186
Query: 535 HPGKT 549
+PGKT
Sbjct: 187 NPGKT 191
>AF285758-1|AAG30114.1| 625|Homo sapiens lysyl-tRNA synthetase
protein.
Length = 625
Score = 165 bits (400), Expect = 1e-40
Identities = 92/173 (53%), Positives = 113/173 (65%), Gaps = 11/173 (6%)
Frame = +1
Query: 64 NELKRRLKAEQKLKEK-------SEKAAQQPVQP----TTXXXXXXXXXXXXPNEYYKLR 210
+ELKRRLKAE+K+ EK SEK Q TT PN+YYK+R
Sbjct: 49 SELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNGVGPEEESVDPNQYYKIR 108
Query: 211 STAVAALKKGSKEEHPYPHKFNVTISLEEFISKYNSLNSGEVLENITVSVAGRVHSIRES 390
S A+ LK E PYPHKF+V ISL +FI KY+ L G+ L +IT+ VAGR+H+ R S
Sbjct: 109 SQAIHQLKVNG--EDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRAS 166
Query: 391 GAKLIFYDLRAEGVKIQVMANAKLYESEEKFETDTDKLRRGDIIGCIGHPGKT 549
G KLIFYDLR EGVK+QVMAN++ Y+SEE+F +KLRRGDIIG G+PGKT
Sbjct: 167 GGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQGNPGKT 219
>AK126584-1|BAC86604.1| 423|Homo sapiens protein ( Homo sapiens
cDNA FLJ44621 fis, clone BRACE2016896, highly similar
to Lysyl-tRNA synthetase (EC 6.1.1.6). ).
Length = 423
Score = 48.8 bits (111), Expect = 1e-05
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Frame = +1
Query: 28 IMAETSSEKVSKNELKRRLKAEQKLKEK-------SEKAAQQ----PVQPTTXXXXXXXX 174
+ + S K+SKNELKRRLKAE+K+ EK SEK Q TT
Sbjct: 9 VKVDGSEPKLSKNELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNGVGPEE 68
Query: 175 XXXXPNEYYKLRSTAVAALKKGSKEEHPYPHKFNVTISLEEFI 303
PN+YYK+RS A+ L G K++ + + + L +F+
Sbjct: 69 ESVDPNQYYKIRSQAI-HLHFGLKDKETRYRQRYLDLILNDFV 110
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.131 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,453,297
Number of Sequences: 237096
Number of extensions: 1240239
Number of successful extensions: 2484
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2476
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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