Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O20
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna ... 140 5e-34
U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna ... 132 2e-31
U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna ... 119 1e-27
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 30 1.3
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 30 1.3
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 30 1.3
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 29 2.2
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 28 3.9
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 28 3.9
U41535-4|AAB63407.1| 655|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 28 5.1
AF003390-5|AAB54270.2| 873|Caenorhabditis elegans Hypothetical ... 28 5.1
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 28 5.1
Z49071-6|CAA88876.2| 292|Caenorhabditis elegans Hypothetical pr... 27 6.7
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 27 6.7
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 8.9
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 8.9
>U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform a protein.
Length = 572
Score = 140 bits (340), Expect = 5e-34
Identities = 75/167 (44%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
Frame = +1
Query: 52 KVSKNELKRRLKAEQKLKEKSEK-AAQQPVQPTTXXXXXXXXXXXXPNEYYKLRSTAVAA 228
K+SKNE KR K +K +E+ EK AA+ V P EY+ +R + A
Sbjct: 7 KLSKNEQKRLAKQAKKEQERLEKDAAKLNVAVADAPKVVREADPSDPQEYFNMRVRMIEA 66
Query: 229 LKKGSKEEHPYPHKFNVTISLEEFISKYNSLNSGEVLENITVSVAGRVHSIRESGAKLIF 408
+ ++P+PHKFNVTISL +FI+KY L +V+E I VSVAGR+HS RESG+KL+F
Sbjct: 67 RRAAG--DNPFPHKFNVTISLTDFITKYTPLEKEQVVEEI-VSVAGRIHSKRESGSKLVF 123
Query: 409 YDLRAEGVKIQVMANAKLYESEEKFETDTDKLRRGDIIGCIGHPGKT 549
YD+ EG IQ+MANAK + + F T D+++RGDI+G G +T
Sbjct: 124 YDIHGEGTHIQIMANAKFHTGDVDFVTLHDRIKRGDIVGFTGRATRT 170
>U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform b protein.
Length = 596
Score = 132 bits (319), Expect = 2e-31
Identities = 71/162 (43%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Frame = +1
Query: 67 ELKRRLKAEQKLKEKSEK-AAQQPVQPTTXXXXXXXXXXXXPNEYYKLRSTAVAALKKGS 243
E KR K +K +E+ EK AA+ V P EY+ +R + A +
Sbjct: 36 EQKRLAKQAKKEQERLEKDAAKLNVAVADAPKVVREADPSDPQEYFNMRVRMIEARRAAG 95
Query: 244 KEEHPYPHKFNVTISLEEFISKYNSLNSGEVLENITVSVAGRVHSIRESGAKLIFYDLRA 423
++P+PHKFNVTISL +FI+KY L +V+E I VSVAGR+HS RESG+KL+FYD+
Sbjct: 96 --DNPFPHKFNVTISLTDFITKYTPLEKEQVVEEI-VSVAGRIHSKRESGSKLVFYDIHG 152
Query: 424 EGVKIQVMANAKLYESEEKFETDTDKLRRGDIIGCIGHPGKT 549
EG IQ+MANAK + + F T D+++RGDI+G G +T
Sbjct: 153 EGTHIQIMANAKFHTGDVDFVTLHDRIKRGDIVGFTGRATRT 194
>U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform c protein.
Length = 514
Score = 119 bits (287), Expect = 1e-27
Identities = 55/100 (55%), Positives = 74/100 (74%)
Frame = +1
Query: 250 EHPYPHKFNVTISLEEFISKYNSLNSGEVLENITVSVAGRVHSIRESGAKLIFYDLRAEG 429
++P+PHKFNVTISL +FI+KY L +V+E I VSVAGR+HS RESG+KL+FYD+ EG
Sbjct: 14 DNPFPHKFNVTISLTDFITKYTPLEKEQVVEEI-VSVAGRIHSKRESGSKLVFYDIHGEG 72
Query: 430 VKIQVMANAKLYESEEKFETDTDKLRRGDIIGCIGHPGKT 549
IQ+MANAK + + F T D+++RGDI+G G +T
Sbjct: 73 THIQIMANAKFHTGDVDFVTLHDRIKRGDIVGFTGRATRT 112
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 37 ETSSEKVSKNELKRRLKAEQKLKEKSEKAAQQ 132
E +K + + K+ + E+KLKEK EKAA++
Sbjct: 223 EEKKQKKEEEKAKKLKEKEEKLKEKEEKAARK 254
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 37 ETSSEKVSKNELKRRLKAEQKLKEKSEKAAQQ 132
E +K + + K+ + E+KLKEK EKAA++
Sbjct: 259 EEKKQKKEEEKAKKLKEKEEKLKEKEEKAARK 290
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 37 ETSSEKVSKNELKRRLKAEQKLKEKSEKAAQQ 132
E +K + + K+ + E+KLKEK EKAA++
Sbjct: 259 EEKKQKKEEEKAKKLKEKEEKLKEKEEKAARK 290
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +1
Query: 34 AETSSEKVSKNELKRRLKAEQKLKEKSEKAAQQPVQPTTXXXXXXXXXXXXPNEYYKLR 210
AE +K + E K+R AE+K ++K EK ++ T P++ Y R
Sbjct: 597 AEEEKKKKALEEEKKRKIAEEKARQKQEKERKKQANKCTFLQNFTFIRHQHPSQTYNER 655
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 28 IMAETSSEKVSKNELKRRLKAEQKLKEKSEK 120
+ E S +K K ELK+R + E ++KE+ EK
Sbjct: 513 VSIEESKKKQEKLELKQREEEEARIKEEEEK 543
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 85 KAEQKLKEKSEKAAQQPVQPTTXXXXXXXXXXXXPNEYYKLRSTAVAALKKGSKEEHP 258
+ +Q+ +++ +++ QQ QP + +K R+ VAA++K S E HP
Sbjct: 252 RTQQQQQQQQQQSTQQQAQPPITLWNNREVGSD--STVWKDRNHMVAAVRKASTENHP 307
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 37 ETSSEKVSKNELKRRLKAEQKLKEKSEK 120
+TSSE ++E +R++K +K KEKS K
Sbjct: 150 QTSSESSEESEEERKVKKSKKNKEKSVK 177
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 37 ETSSEKVSKNELKRRLKAEQKLKEKSEK 120
+TSSE ++E +R++K +K KEKS K
Sbjct: 150 QTSSESSEESEEERKVKKSKKNKEKSVK 177
>U41535-4|AAB63407.1| 655|Caenorhabditis elegans Hypothetical
protein F18A1.5 protein.
Length = 655
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/82 (25%), Positives = 33/82 (40%)
Frame = +1
Query: 190 NEYYKLRSTAVAALKKGSKEEHPYPHKFNVTISLEEFISKYNSLNSGEVLENITVSVAGR 369
N Y V LK ++ H F I + + + +YN+L S ++ + I V
Sbjct: 33 NNGYPGHDGIVQVLKGKVEQGEQLGHAFTFRIRISDGVFQYNALMSADIDDQIKREVEHL 92
Query: 370 VHSIRESGAKLIFYDLRAEGVK 435
V + K YD + EG K
Sbjct: 93 VEGTIIALTKFEIYD-QGEGAK 113
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 49 EKVSKNELKRRLKAEQKLKEKSEKAAQQPVQP 144
EK+ E +R+ K E+KLK++ K + QP
Sbjct: 366 EKIEAREERRKRKEEEKLKDELSKIKELEEQP 397
>AF003390-5|AAB54270.2| 873|Caenorhabditis elegans Hypothetical
protein R155.4 protein.
Length = 873
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +1
Query: 193 EYYKLRSTAVAALKKGSKEEHPYPHKFNVTISLEEFISKYNSLNSGEVLENI---TVSVA 363
E + L +++A KG K + P T L++F+S+Y +L+ + EN+ S+
Sbjct: 149 ENHYLAMSSIADKVKGFKGAYVVPDGDPYTNLLDKFVSQYVTLDIESLAENLKDFISSIE 208
Query: 364 GRVHSIRESGAKLIFYDLRA 423
I ++ K +FY +++
Sbjct: 209 MLKTDITKTTTKTMFYKIQS 228
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 49 EKVSKNELKRRLKAEQKLKEKSEKAAQQPVQP 144
EK+ E +R+ K E+KLK++ K + QP
Sbjct: 366 EKIEAREERRKRKEEEKLKDELSKIKELEEQP 397
>Z49071-6|CAA88876.2| 292|Caenorhabditis elegans Hypothetical
protein T22C8.4 protein.
Length = 292
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Frame = +1
Query: 34 AETSSE-KVSKNE--LKRRLKAEQKLKEKSEKAAQQPVQPTTXXXXXXXXXXXXPNEYYK 204
+ TSSE K+ + E +K++L+ EQK K + +K + + + P+E K
Sbjct: 95 SSTSSEAKIQRMEDAMKKKLEKEQKEKARLKKREETLKKKSETAAAKKNKIVGAPSEDPK 154
Query: 205 LRS----TAVAALKKGSKEE-HPYPHK 270
+R+ A K K++ H + HK
Sbjct: 155 IRALQCDICFALFKNADKKKRHDHSHK 181
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily assigned
gene nameprotein 278 protein.
Length = 1130
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 37 ETSSEKVSKNELKRRLKAEQKLKEKSEKAAQQPVQPTTXXXXXXXXXXXXPNEYYKLRST 216
E +SEK ++ E ++ KAE++ KEK+EKAA++ + P+ +LR
Sbjct: 1018 EEASEKRTRKEAEK--KAEKE-KEKAEKAAKEAAK--ELAREKSPARAKSPSILTRLRDR 1072
Query: 217 AVAALKKGSKEEHP 258
+ A K + E P
Sbjct: 1073 SPAKSKSDNLESTP 1086
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
glp-1 protein.
Length = 1492
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 1 DEGVNYYL*IMAETSSEKVSKNELKRRLKAEQKLKEKSEKAAQ 129
DEG +Y +MA + + ++ + + E + KE+++K A+
Sbjct: 695 DEGEQFYRQLMARCDQFAIPVHAMEEQYREEMEKKERAKKEAE 737
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 1 DEGVNYYL*IMAETSSEKVSKNELKRRLKAEQKLKEKSEKAAQ 129
DEG +Y +MA + + ++ + + E + KE+++K A+
Sbjct: 715 DEGEQFYRQLMARCDQFAIPVHAMEEQYREEMEKKERAKKEAE 757
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.131 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,017,557
Number of Sequences: 27780
Number of extensions: 191960
Number of successful extensions: 560
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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