Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O15
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 40 8e-04
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 31 0.39
03_05_1143 + 30709825-30709926,30710105-30710260,30710356-307104... 31 0.39
08_02_1466 + 27322340-27322610,27322907-27322995,27323276-273233... 30 1.2
07_03_1474 - 26766078-26766536,26766634-26766885,26767201-267674... 29 1.6
10_08_0136 - 15122420-15122469,15123845-15124334,15124822-151249... 29 2.7
01_05_0407 - 21883009-21883950 29 2.7
08_02_0750 + 20786096-20786475,20786689-20786822,20786906-20787057 28 3.6
02_05_1344 + 35823588-35824643 28 3.6
07_03_1150 - 24375859-24376050,24376173-24376283,24376488-243766... 28 4.8
07_01_1006 + 8528508-8529285,8529376-8529544,8530179-8530445,853... 28 4.8
11_01_0457 - 3532604-3532971,3533072-3534019,3534304-3534331 27 6.3
07_01_0995 + 8384551-8384709,8386598-8386762 27 6.3
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 27 6.3
01_01_0552 - 4065623-4065698,4066133-4066218 27 6.3
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 40.3 bits (90), Expect = 8e-04
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +3
Query: 207 EQEIADLKRRLQAQQQRVKHITVLLSESERECARMAQLSELLKGELRRI-RGSTQNPHNT 383
E+E+A +R + A QQ ++ E ERE Q +LK ELR + R + +
Sbjct: 679 EEELAQSQRHILALQQEIE-------ELERENRLHDQQEAMLKTELRNMERSQKREGIDM 731
Query: 384 EYMKNVTLKFLTLAPGDERSRLVPVLQKILTLTTEETQ 497
Y+KNV LK L E L+PV+ +L + EE Q
Sbjct: 732 TYLKNVILKLLETG---EVGALLPVVATLLQFSPEEWQ 766
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 31.5 bits (68), Expect = 0.39
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +3
Query: 180 DTTSLAFTPEQEIADLKRRLQAQQQRVKHITVLLSESERECARMAQLSELLKGELR 347
D TS ++ +ADL++ L +++++++H + L E E + A+ E L+ ++
Sbjct: 328 DATSHVAQLQENVADLEKNLASEREKIQHSSQTLKEMESVYNKHAKRQEDLENNMK 383
>03_05_1143 +
30709825-30709926,30710105-30710260,30710356-30710439,
30710769-30710882,30711019-30711111,30711888-30711977,
30712157-30712227,30712300-30712374,30712481-30712568,
30712748-30712806,30712893-30712956,30713030-30713095,
30713283-30713435,30713522-30713626,30713739-30713974,
30714104-30714173,30714286-30714339,30714501-30714557,
30714662-30714741,30716056-30717919
Length = 1226
Score = 31.5 bits (68), Expect = 0.39
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 192 LAFTPEQEIADLKRRLQAQQQRVKHITVLLSESERECARMAQLSELLKGELRRIRG-STQ 368
LA +E+ K RL+ ++ R+K + + S + + Q +E L E+ +RG +
Sbjct: 440 LATQRAEEVRSFKMRLRFREDRIKRLEQVTSGKLSAESHLLQENEDLVKEVDALRGLLDR 499
Query: 369 NPHNTEY-MKNVTLK 410
NP T + M+N+ LK
Sbjct: 500 NPEVTRFAMENLQLK 514
>08_02_1466 +
27322340-27322610,27322907-27322995,27323276-27323368,
27323515-27323613,27323763-27324017
Length = 268
Score = 29.9 bits (64), Expect = 1.2
Identities = 34/124 (27%), Positives = 61/124 (49%)
Frame = +3
Query: 126 PVPLDRLLEEGVPDDEALDTTSLAFTPEQEIADLKRRLQAQQQRVKHITVLLSESERECA 305
PVP R E P+D + TS E+ +AD++R L+A R ++ V L S ++
Sbjct: 36 PVPAWRPPEFVEPEDVWILGTS--HLSEESVADVERVLRAV--RPDNVVVELCRSRQD-- 89
Query: 306 RMAQLSELLKGELRRIRGSTQNPHNTEYMKNVTLKFLTLAPGDERSRLVPVLQKILTLTT 485
R Q + L+ L + N + + + + +L+ DE+++LV L + +T TT
Sbjct: 90 RRGQTALALRLLLAVFSSKISSGANRPFGEELERAWKSLS-WDEKTKLVVSLFRGITSTT 148
Query: 486 EETQ 497
+ +Q
Sbjct: 149 DTSQ 152
>07_03_1474 -
26766078-26766536,26766634-26766885,26767201-26767401,
26767986-26768156,26768249-26768433,26768526-26768851,
26769430-26770631
Length = 931
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 168 DEALDTTSLAFTPEQEIADLKRRL 239
DEA+DT A PE E+A+L+R+L
Sbjct: 798 DEAVDTLKRAGVPEDEMANLERQL 821
>10_08_0136 -
15122420-15122469,15123845-15124334,15124822-15124935,
15125022-15125303,15125422-15125591,15125670-15125757,
15126128-15126173,15126254-15126336,15126595-15126694,
15127002-15127081,15127200-15127283,15127373-15127531,
15128617-15128772,15129634-15130197
Length = 821
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +3
Query: 120 RSPVPLDRLLEEGVPDDEALDTTSLAFTPEQEIADLKRRLQAQQQRVKHITVLLSESERE 299
+ +P+++L++ P+ E + +L TP + DLK L+ ++K T + E
Sbjct: 188 KEKIPMEQLVDRDFPESEPIKPPALDDTPFTHVEDLK-SLEVLATKLKSATEFAVDLEHN 246
Query: 300 CARMAQ 317
R Q
Sbjct: 247 HYRSFQ 252
>01_05_0407 - 21883009-21883950
Length = 313
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 174 LRHQEHLLLTICPKAPEIDRFLNLTCMVWMAEDWVLTQSPHPLPEVSS 31
L H+ HLL + +P I +T +V + +T S PLP SS
Sbjct: 15 LNHERHLLRRLAVSSPTILHAAWVTALVAVCLALCITHSRKPLPSSSS 62
>08_02_0750 + 20786096-20786475,20786689-20786822,20786906-20787057
Length = 221
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +3
Query: 210 QEIADLKRRLQAQQQRVKHITVLLSESERECARMAQLSELLKGELRRIRGSTQNPH 377
QE+ ++ L+ +++ +T + E++ MAQ SE L+ E+++ + + H
Sbjct: 121 QELVRMRGTLEYEKKARPDLTAQVQAMEKDLVSMAQESEKLRAEIKKRNAPSFSGH 176
>02_05_1344 + 35823588-35824643
Length = 351
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 165 DDEALDTTSLAFTPEQEIADLKRRLQAQQQR 257
++E L F EQE+ D++RRL+A + R
Sbjct: 228 EEENLTLKERLFLMEQELGDMRRRLEALESR 258
>07_03_1150 -
24375859-24376050,24376173-24376283,24376488-24376655,
24376850-24377451,24377546-24377648,24378461-24378610,
24379918-24379956
Length = 454
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +3
Query: 180 DTTSLAFTPEQEIADLKRRLQAQQQRVKHITVLLSESERECARMAQLSELLKGELRRIRG 359
++ LA EI LK L + H TV S S CA + +LS L +R
Sbjct: 371 ESHELAQKQSMEIKKLKDSLGRFNSALNHGTVCRSCSCGFCAMLLELSNCSIEGLVDVRS 430
Query: 360 STQNPHN 380
S + P N
Sbjct: 431 SNEKPQN 437
>07_01_1006 +
8528508-8529285,8529376-8529544,8530179-8530445,
8530533-8530878,8530964-8531101,8531197-8531322,
8531422-8531634,8531721-8531863,8531891-8532009,
8532099-8532295,8532379-8532729,8532811-8533395
Length = 1143
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 111 LNLTCMVWMAEDWVLTQSPHPLP 43
+++ C +W A W+L Q P LP
Sbjct: 370 ISVICEIWFAMSWILDQFPKWLP 392
>11_01_0457 - 3532604-3532971,3533072-3534019,3534304-3534331
Length = 447
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 333 KGELRRIRGSTQNPHNTEYMKNVTL 407
+G+L + S QN NT Y+ ++TL
Sbjct: 219 RGDLHALLHSAQNDENTSYLNHITL 243
>07_01_0995 + 8384551-8384709,8386598-8386762
Length = 107
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 219 ADLKRRLQ--AQQQRVKHITVLLSESERECARMAQLSELLKGELRRIRGSTQNPHNT 383
AD +RR Q A++ VK ++ S+ E+ ++ +L E L+ +L RGS H T
Sbjct: 35 ADARRRHQGLAKEDAVKE-KIIFSQ-EKNIQQLNELIESLQRQLLHCRGSNNTVHTT 89
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 210 QEIADLKRRLQAQQQRVKHITVLLSESERE 299
++I DLKR+ +++QQR+ L+ +ERE
Sbjct: 345 EDIEDLKRQERSRQQRILKAKEALAAAERE 374
>01_01_0552 - 4065623-4065698,4066133-4066218
Length = 53
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -1
Query: 343 NSPFSSSLSCAIRAHSRSDSDSNTVMC-FTLCCCAC 239
N P + +S + R + C FTLCCC C
Sbjct: 3 NPPAAQEMSYSDHVKKRHEDKGCLYACLFTLCCCFC 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,309,860
Number of Sequences: 37544
Number of extensions: 229496
Number of successful extensions: 821
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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