Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O14
(477 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 213 4e-56
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 210 3e-55
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 205 1e-53
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 204 3e-53
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 204 3e-53
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 204 3e-53
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 149 1e-36
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 149 1e-36
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 101 4e-22
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 101 4e-22
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 101 4e-22
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 100 5e-22
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 100 5e-22
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 99 2e-21
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 99 2e-21
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 97 4e-21
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 96 1e-20
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 96 1e-20
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 96 1e-20
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 95 2e-20
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 94 4e-20
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 94 4e-20
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 91 3e-19
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 74 5e-14
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 74 5e-14
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 72 2e-13
Z66520-2|CAA91387.1| 168|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical pr... 27 9.2
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 27 9.2
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 27 9.2
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 27 9.2
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 27 9.2
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 27 9.2
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 27 9.2
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 27 9.2
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 27 9.2
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 27 9.2
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 27 9.2
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 27 9.2
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 213 bits (521), Expect = 4e-56
Identities = 97/116 (83%), Positives = 105/116 (90%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEAS----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 477
GGKYVPRA L+DLEPGTMD+VR+G +GQLFRPDNFVFGQSGAGNNWAKGHYTEGA
Sbjct: 56 -GGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 110
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 210 bits (514), Expect = 3e-55
Identities = 95/116 (81%), Positives = 105/116 (90%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIGAKFWE+IS+EHGI P G Y+G SDLQLERI+VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEAN----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 477
GGKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGA
Sbjct: 56 -GGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 110
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 205 bits (500), Expect = 1e-53
Identities = 92/116 (79%), Positives = 103/116 (88%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G SDLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEAN----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 477
GKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGA
Sbjct: 56 -NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 110
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 204 bits (497), Expect = 3e-53
Identities = 91/116 (78%), Positives = 103/116 (88%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G +DLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEAN----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 477
GKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGA
Sbjct: 56 -NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 110
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 204 bits (497), Expect = 3e-53
Identities = 92/116 (79%), Positives = 103/116 (88%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 477
KYVPRA+L+DLEPGTMD+VRSG +GQLFRPDN+VFGQSGAGNNWAKGHYTEGA
Sbjct: 56 -SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGA 110
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 204 bits (497), Expect = 3e-53
Identities = 92/116 (79%), Positives = 103/116 (88%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 477
KYVPRA+L+DLEPGTMD+VRSG +GQLFRPDN+VFGQSGAGNNWAKGHYTEGA
Sbjct: 56 -SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGA 110
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 149 bits (361), Expect = 1e-36
Identities = 68/116 (58%), Positives = 88/116 (75%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G + QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEM------ 54
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 477
G KYVPRAIL+DL+P +++ VRS YG+LF P+N V G+SGAGNNW++G+Y +GA
Sbjct: 55 EGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGA 110
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 149 bits (361), Expect = 1e-36
Identities = 68/116 (58%), Positives = 88/116 (75%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G + QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEM------ 54
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 477
G KYVPRAIL+DL+P +++ VRS YG+LF P+N V G+SGAGNNW++G+Y +GA
Sbjct: 55 EGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGA 110
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 101 bits (241), Expect = 4e-22
Identities = 46/115 (40%), Positives = 68/115 (59%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G
Sbjct: 56 -SGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 101 bits (241), Expect = 4e-22
Identities = 53/115 (46%), Positives = 68/115 (59%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MREIV + GQ G QIG WE+ EHGI P G+ + +E S YN T
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQS--YNTFFSETPS 58
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
GK+VPRAI +DLEP +D VR+G Y +LF P+ + G+ A NN+A+GHYT G
Sbjct: 59 --GKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIG 111
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 101 bits (241), Expect = 4e-22
Identities = 46/115 (40%), Positives = 68/115 (59%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G
Sbjct: 56 -SGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 100 bits (240), Expect = 5e-22
Identities = 45/115 (39%), Positives = 66/115 (57%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 100 bits (240), Expect = 5e-22
Identities = 45/115 (39%), Positives = 66/115 (57%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 98.7 bits (235), Expect = 2e-21
Identities = 44/115 (38%), Positives = 66/115 (57%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G + + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 98.7 bits (235), Expect = 2e-21
Identities = 44/115 (38%), Positives = 66/115 (57%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G + + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTG----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 97.5 bits (232), Expect = 4e-21
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTS-DLQLERISVYYNEASVATAE 309
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESM----- 60
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
GK+VPRAI +DLEP +D +R+G YG LF PD + G+ A NN+A+GHYT G
Sbjct: 61 -NGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIG 114
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 96.3 bits (229), Expect = 1e-20
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVAT 303
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 304 AESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIG 111
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 96.3 bits (229), Expect = 1e-20
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVAT 303
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 304 AESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIG 111
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 96.3 bits (229), Expect = 1e-20
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVAT 303
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 304 AESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIG 111
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 95.1 bits (226), Expect = 2e-20
Identities = 47/116 (40%), Positives = 68/116 (58%)
Frame = +1
Query: 127 KMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATA 306
+ RE++ + GQ G Q+G WE+ EHGI P G+ L ++ S +N T
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDS--FNTFFSETM 62
Query: 307 ESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
GK+VPRAI++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G
Sbjct: 63 --AGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIG 116
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 94.3 bits (224), Expect = 4e-20
Identities = 48/116 (41%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG--VYRGTSDLQLERISVYYNEASVATA 306
RE++ + GQ G QIG WE+ EHGI P G V T D + E I+ ++ E +
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETA---- 63
Query: 307 ESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
GGK+VPR + +DLEP +D VR+G Y LF P+ + G+ A N +A+G YT G
Sbjct: 64 --GGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIG 117
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 94.3 bits (224), Expect = 4e-20
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVATA 306
RE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG---- 56
Query: 307 ESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G
Sbjct: 57 --SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIG 110
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 91.5 bits (217), Expect = 3e-19
Identities = 44/115 (38%), Positives = 66/115 (57%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE++ + GQ G QIG WE+ EHGI P G D + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGY---- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G++VPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G
Sbjct: 56 --GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVG 108
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 74.1 bits (174), Expect = 5e-14
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +1
Query: 139 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGG 318
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQ-------ADDD 59
Query: 319 KYVPRAILLDLEPGTMDA-VRSGGYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEG 474
YVPRA+L+DLEP ++ ++S + LF DN GAGNNWA G Y +G
Sbjct: 60 HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQG 113
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 74.1 bits (174), Expect = 5e-14
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +1
Query: 139 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGG 318
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQ-------ADDD 59
Query: 319 KYVPRAILLDLEPGTMDA-VRSGGYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEG 474
YVPRA+L+DLEP ++ ++S + LF DN GAGNNWA G Y +G
Sbjct: 60 HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQG 113
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 72.1 bits (169), Expect = 2e-13
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +1
Query: 208 EHGIDPTG--VYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRS 381
EHGI P G V T D + E I+ ++ E + GGK+VPR + +DLEP +D VR+
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETA------GGKHVPRCLFVDLEPTVVDEVRT 58
Query: 382 GGYGQLFRPDNFVFGQSGAGNNWAKGHYTEG 474
G Y LF P+ + G+ A N +A+G YT G
Sbjct: 59 GTYRSLFHPEQLLSGKEDAANCYARGRYTIG 89
>Z66520-2|CAA91387.1| 168|Caenorhabditis elegans Hypothetical
protein F49E12.2 protein.
Length = 168
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 349 GRGVWRGARTCHRSPPSQQRPHYNKRRFSRVVNRLC 242
G + G CH +P RP+ + +++ RV+ +C
Sbjct: 53 GETMIHGQIICHGTPLDYVRPYLSSKKYPRVIINIC 88
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 154 AGQCGNQIGAKFWEIISEEHGIDPTGVYR 240
+G C ++G K WE+ SE G PTG+ +
Sbjct: 233 SGDCLKKMGKK-WEVTSEAVGPRPTGILK 260
>Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical
protein T26F2.3 protein.
Length = 316
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +1
Query: 238 RGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNF 417
RGTS + ++ N +++ T + K+ + EP + A+R G L++ +
Sbjct: 75 RGTSLKETIDADIFSNRSNLTTIATASKF-------NREPSEIIALRKNGVIFLYKNEKS 127
Query: 418 VFGQSGAGNNWAK 456
G+ G G N+ K
Sbjct: 128 YEGKYGGGYNFEK 140
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 235 YRGTSDLQLERISVYYNEASVATAESGGK 321
Y GT D Q+E ++ ++E T E G K
Sbjct: 1337 YHGTIDPQIEELATQWDELEKTTEEKGQK 1365
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 235 YRGTSDLQLERISVYYNEASVATAESGGK 321
Y GT D Q+E ++ ++E T E G K
Sbjct: 1337 YHGTIDPQIEELATQWDELEKTTEEKGQK 1365
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 26.6 bits (56), Expect = 9.2
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = -2
Query: 383 PERTASMVPGSRSRSMARGTYLPPLSAVATEASL**TEILSSCKSLVPR*TPVGSMPCSS 204
PE T P S S + PP +A T A+ IL S + P +P+GS S+
Sbjct: 48 PEETP---PSSVDASPLQSVMRPPPTAPPTSAATP-NRILPSSNAASPYGSPLGSSILSN 103
Query: 203 DIISQNFAPI 174
+ FAPI
Sbjct: 104 QPLVLPFAPI 113
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 26.6 bits (56), Expect = 9.2
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = -2
Query: 383 PERTASMVPGSRSRSMARGTYLPPLSAVATEASL**TEILSSCKSLVPR*TPVGSMPCSS 204
PE T P S S + PP +A T A+ IL S + P +P+GS S+
Sbjct: 73 PEETP---PSSVDASPLQSVMRPPPTAPPTSAATP-NRILPSSNAASPYGSPLGSSILSN 128
Query: 203 DIISQNFAPI 174
+ FAPI
Sbjct: 129 QPLVLPFAPI 138
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 26.6 bits (56), Expect = 9.2
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = -2
Query: 383 PERTASMVPGSRSRSMARGTYLPPLSAVATEASL**TEILSSCKSLVPR*TPVGSMPCSS 204
PE T P S S + PP +A T A+ IL S + P +P+GS S+
Sbjct: 56 PEETP---PSSVDASPLQSVMRPPPTAPPTSAATP-NRILPSSNAASPYGSPLGSSILSN 111
Query: 203 DIISQNFAPI 174
+ FAPI
Sbjct: 112 QPLVLPFAPI 121
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 26.6 bits (56), Expect = 9.2
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = -2
Query: 383 PERTASMVPGSRSRSMARGTYLPPLSAVATEASL**TEILSSCKSLVPR*TPVGSMPCSS 204
PE T P S S + PP +A T A+ IL S + P +P+GS S+
Sbjct: 67 PEETP---PSSVDASPLQSVMRPPPTAPPTSAATP-NRILPSSNAASPYGSPLGSSILSN 122
Query: 203 DIISQNFAPI 174
+ FAPI
Sbjct: 123 QPLVLPFAPI 132
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 235 YRGTSDLQLERISVYYNEASVATAESGGK 321
Y GT D Q+E ++ ++E T E G K
Sbjct: 1337 YHGTIDPQIEELATQWDELEKTTEEKGQK 1365
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 235 YRGTSDLQLERISVYYNEASVATAESGGK 321
Y GT D Q+E ++ ++E T E G K
Sbjct: 1337 YHGTIDPQIEELATQWDELEKTTEEKGQK 1365
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 235 YRGTSDLQLERISVYYNEASVATAESGGK 321
Y GT D Q+E ++ ++E T E G K
Sbjct: 1337 YHGTIDPQIEELATQWDELEKTTEEKGQK 1365
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 26.6 bits (56), Expect = 9.2
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = -2
Query: 383 PERTASMVPGSRSRSMARGTYLPPLSAVATEASL**TEILSSCKSLVPR*TPVGSMPCSS 204
PE T P S S + PP +A T A+ IL S + P +P+GS S+
Sbjct: 67 PEETP---PSSVDASPLQSVMRPPPTAPPTSAATP-NRILPSSNAASPYGSPLGSSILSN 122
Query: 203 DIISQNFAPI 174
+ FAPI
Sbjct: 123 QPLVLPFAPI 132
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 26.6 bits (56), Expect = 9.2
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = -2
Query: 383 PERTASMVPGSRSRSMARGTYLPPLSAVATEASL**TEILSSCKSLVPR*TPVGSMPCSS 204
PE T P S S + PP +A T A+ IL S + P +P+GS S+
Sbjct: 48 PEETP---PSSVDASPLQSVMRPPPTAPPTSAATP-NRILPSSNAASPYGSPLGSSILSN 103
Query: 203 DIISQNFAPI 174
+ FAPI
Sbjct: 104 QPLVLPFAPI 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.135 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,875,142
Number of Sequences: 27780
Number of extensions: 170953
Number of successful extensions: 612
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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