SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_O09
         (411 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M86842-1|AAA52071.1|  351|Homo sapiens cAMP response element reg...    41   0.001
D90209-1|BAA14234.1|  351|Homo sapiens DNA binding protein TAXRE...    41   0.001
CR456384-1|CAG30270.1|  351|Homo sapiens ATF4 protein.                 41   0.001
CR450353-1|CAG29349.1|  351|Homo sapiens ATF4 protein.                 41   0.001
BC073990-1|AAH73990.1|  351|Homo sapiens activating transcriptio...    41   0.001
BC073754-1|AAH73754.1|  351|Homo sapiens activating transcriptio...    41   0.001
BC044895-1|AAH44895.1|  351|Homo sapiens activating transcriptio...    41   0.001
BC024775-1|AAH24775.1|  351|Homo sapiens activating transcriptio...    41   0.001
BC022088-1|AAH22088.1|  351|Homo sapiens activating transcriptio...    41   0.001
BC016855-1|AAH16855.1|  351|Homo sapiens activating transcriptio...    41   0.001
BC011994-1|AAH11994.1|  351|Homo sapiens activating transcriptio...    41   0.001
BC008090-1|AAH08090.1|  351|Homo sapiens activating transcriptio...    41   0.001
AL022312-4|CAB45284.1|  351|Homo sapiens activating transcriptio...    41   0.001
BC005174-1|AAH05174.1|  282|Homo sapiens activating transcriptio...    39   0.007
AF305687-1|AAG22558.1|  282|Homo sapiens transcription factor AT...    39   0.007
AF101388-1|AAD28370.1|  122|Homo sapiens activating transcriptio...    39   0.007
AB073613-1|BAD38650.1|  282|Homo sapiens activating transcriptio...    39   0.007
AB021663-1|BAA78477.2|  282|Homo sapiens leucine-zipper protein ...    39   0.007
AK097604-1|BAC05115.1|  216|Homo sapiens protein ( Homo sapiens ...    30   2.6  
AY316592-1|AAR08265.1| 1755|Homo sapiens BCL-6 corepressor long ...    29   4.5  
AF317391-1|AAG41429.1| 1721|Homo sapiens BCL-6 corepressor protein.    29   4.5  
BC051303-1|AAH51303.1|  163|Homo sapiens jun dimerization protei...    29   7.9  
AC009363-1|AAF21148.1|   96|Homo sapiens jdp2 protein.                 29   7.9  
AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant pr...    29   7.9  
AB077880-1|BAB83896.1|  163|Homo sapiens jun dimerization protei...    29   7.9  

>M86842-1|AAA52071.1|  351|Homo sapiens cAMP response element
           regulatory protein protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>D90209-1|BAA14234.1|  351|Homo sapiens DNA binding protein TAXREB67
           protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>CR456384-1|CAG30270.1|  351|Homo sapiens ATF4 protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>CR450353-1|CAG29349.1|  351|Homo sapiens ATF4 protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>BC073990-1|AAH73990.1|  351|Homo sapiens activating transcription
           factor 4 (tax-responsive enhancer element B67) protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>BC073754-1|AAH73754.1|  351|Homo sapiens activating transcription
           factor 4 (tax-responsive enhancer element B67) protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>BC044895-1|AAH44895.1|  351|Homo sapiens activating transcription
           factor 4 (tax-responsive enhancer element B67) protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>BC024775-1|AAH24775.1|  351|Homo sapiens activating transcription
           factor 4 (tax-responsive enhancer element B67) protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>BC022088-1|AAH22088.1|  351|Homo sapiens activating transcription
           factor 4 (tax-responsive enhancer element B67) protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>BC016855-1|AAH16855.1|  351|Homo sapiens activating transcription
           factor 4 (tax-responsive enhancer element B67) protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>BC011994-1|AAH11994.1|  351|Homo sapiens activating transcription
           factor 4 (tax-responsive enhancer element B67) protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>BC008090-1|AAH08090.1|  351|Homo sapiens activating transcription
           factor 4 (tax-responsive enhancer element B67) protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>AL022312-4|CAB45284.1|  351|Homo sapiens activating transcription
           factor 4 (tax-responsiveene protein.
          Length = 351

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNE 402
           K EQNK AATRYRQKK+AE E L  E
Sbjct: 284 KMEQNKTAATRYRQKKRAEQEALTGE 309


>BC005174-1|AAH05174.1|  282|Homo sapiens activating transcription
           factor 5 protein.
          Length = 282

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 274 PSRPKPY---XXXXXXXXXXKKEQNKNAATRYRQKKKAEVEVLLNEEQ 408
           PSR  PY             K++QNK+AA RYRQ+K+AE E L  E Q
Sbjct: 194 PSRLAPYPHPATTRGDRKQKKRDQNKSAALRYRQRKRAEGEALEGECQ 241


>AF305687-1|AAG22558.1|  282|Homo sapiens transcription factor ATFx
           protein.
          Length = 282

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 274 PSRPKPY---XXXXXXXXXXKKEQNKNAATRYRQKKKAEVEVLLNEEQ 408
           PSR  PY             K++QNK+AA RYRQ+K+AE E L  E Q
Sbjct: 194 PSRLAPYPHPATTRGDRKQKKRDQNKSAALRYRQRKRAEGEALEGECQ 241


>AF101388-1|AAD28370.1|  122|Homo sapiens activating transcription
           factor 5 protein.
          Length = 122

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 274 PSRPKPY---XXXXXXXXXXKKEQNKNAATRYRQKKKAEVEVLLNEEQ 408
           PSR  PY             K++QNK+AA RYRQ+K+AE E L  E Q
Sbjct: 34  PSRLAPYPHPATTRGDRKQKKRDQNKSAALRYRQRKRAEGEALEGECQ 81


>AB073613-1|BAD38650.1|  282|Homo sapiens activating transcription
           factor 5 protein.
          Length = 282

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 274 PSRPKPY---XXXXXXXXXXKKEQNKNAATRYRQKKKAEVEVLLNEEQ 408
           PSR  PY             K++QNK+AA RYRQ+K+AE E L  E Q
Sbjct: 194 PSRLAPYPHPATTRGDRKQKKRDQNKSAALRYRQRKRAEGEALEGECQ 241


>AB021663-1|BAA78477.2|  282|Homo sapiens leucine-zipper protein
           protein.
          Length = 282

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 274 PSRPKPY---XXXXXXXXXXKKEQNKNAATRYRQKKKAEVEVLLNEEQ 408
           PSR  PY             K++QNK+AA RYRQ+K+AE E L  E Q
Sbjct: 194 PSRLAPYPHPATTRGDRKQKKRDQNKSAALRYRQRKRAEGEALEGECQ 241


>AK097604-1|BAC05115.1|  216|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40285 fis, clone TESTI2027820. ).
          Length = 216

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 313 GHRRTVNMVLGETVPTIPHRWRRT 242
           G RR  + VLG   PT   RWRRT
Sbjct: 21  GQRRCASRVLGAPGPTFDKRWRRT 44


>AY316592-1|AAR08265.1| 1755|Homo sapiens BCL-6 corepressor long
            isoform protein.
          Length = 1755

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 81   ASYCTDVGTGFSRLPMRSRRDGGTCTSWSFTARFSPA 191
            A+YC      FS L M+ R  G   T  S   +FSPA
Sbjct: 1013 AAYCERAMMRFSELEMKEREGGHPATKDSEMCKFSPA 1049


>AF317391-1|AAG41429.1| 1721|Homo sapiens BCL-6 corepressor protein.
          Length = 1721

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 81   ASYCTDVGTGFSRLPMRSRRDGGTCTSWSFTARFSPA 191
            A+YC      FS L M+ R  G   T  S   +FSPA
Sbjct: 1013 AAYCERAMMRFSELEMKEREGGHPATKDSEMCKFSPA 1049


>BC051303-1|AAH51303.1|  163|Homo sapiens jun dimerization protein 2
           protein.
          Length = 163

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNEEQ 408
           ++E+NK AA R R KKK   E L  E +
Sbjct: 78  RREKNKVAAARCRNKKKERTEFLQRESE 105


>AC009363-1|AAF21148.1|   96|Homo sapiens jdp2 protein.
          Length = 96

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNEEQ 408
           ++E+NK AA R R KKK   E L  E +
Sbjct: 11  RREKNKVAAARCRNKKKERTEFLQRESE 38


>AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant
           protein.
          Length = 410

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = -3

Query: 271 PTIPHRWRRTAVMTAVMNAV*RSGFPAAGENRAVKLHD----VQVPPSRRDRIGSRLKPV 104
           P+ P + +R AV++ +  A+ R+GFP  G  + V   +     + PP +  +I +   P+
Sbjct: 137 PSSPRQVKR-AVVSGLKQALGRAGFPGGGNTQVVSPKEENKAAEPPPPKIPKIETTHPPL 195

Query: 103 P 101
           P
Sbjct: 196 P 196


>AB077880-1|BAB83896.1|  163|Homo sapiens jun dimerization protein 2
           protein.
          Length = 163

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 325 KKEQNKNAATRYRQKKKAEVEVLLNEEQ 408
           ++E+NK AA R R KKK   E L  E +
Sbjct: 78  RREKNKVAAARCRNKKKERTEFLQRESE 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.308    0.126    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,565,188
Number of Sequences: 237096
Number of extensions: 1278618
Number of successful extensions: 1776
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)

- SilkBase 1999-2023 -