Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O08
(504 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 282 9e-77
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 282 9e-77
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 282 1e-76
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 281 2e-76
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 281 3e-76
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 280 5e-76
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 155 1e-38
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 155 1e-38
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 110 6e-25
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 110 6e-25
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 110 6e-25
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 110 6e-25
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 108 3e-24
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 108 3e-24
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 108 3e-24
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 108 3e-24
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 107 3e-24
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 107 5e-24
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 106 8e-24
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 106 8e-24
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 102 2e-22
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 102 2e-22
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 102 2e-22
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 94 4e-20
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 61 5e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 29 1.9
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 29 1.9
AC006708-7|ABM01863.1| 168|Caenorhabditis elegans Hypothetical ... 29 1.9
Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical pr... 28 3.3
L11247-1|AAA28010.2| 484|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 27 7.7
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 27 7.7
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 282 bits (692), Expect = 9e-77
Identities = 129/136 (94%), Positives = 134/136 (98%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
FDAKNMMAACDPRHGRYLT A IFRGRMSMKEVDEQM+NIQNKNSSYFV+WIPNNVKTAV
Sbjct: 294 FDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAV 353
Query: 190 CDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 369
CDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 354 CDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 370 HMNDLISEYQQYQEAA 417
+MNDL+SEYQQYQEAA
Sbjct: 414 NMNDLVSEYQQYQEAA 429
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 282 bits (692), Expect = 9e-77
Identities = 129/136 (94%), Positives = 134/136 (98%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
FDAKNMMAACDPRHGRYLT A IFRGRMSMKEVDEQM+NIQNKNSSYFV+WIPNNVKTAV
Sbjct: 294 FDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAV 353
Query: 190 CDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 369
CDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 354 CDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 370 HMNDLISEYQQYQEAA 417
+MNDL+SEYQQYQEAA
Sbjct: 414 NMNDLVSEYQQYQEAA 429
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 282 bits (691), Expect = 1e-76
Identities = 128/135 (94%), Positives = 134/135 (99%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
FDAKNMMAACDPRHGRYLTVA +FRGRMSM+EVDEQM+N+QNKNSSYFVEWIPNNVKTAV
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAV 353
Query: 190 CDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 369
CDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 354 CDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 370 HMNDLISEYQQYQEA 414
+MNDLISEYQQYQEA
Sbjct: 414 NMNDLISEYQQYQEA 428
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 281 bits (690), Expect = 2e-76
Identities = 127/135 (94%), Positives = 134/135 (99%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
FDAKNMMAACDPRHGRYLTVA +FRGRMSMKEVDEQM+N+QNKNSSYFVEWIPNNVKTAV
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV 353
Query: 190 CDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 369
CDIPPRG+KMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 354 CDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 370 HMNDLISEYQQYQEA 414
+MNDL+SEYQQYQEA
Sbjct: 414 NMNDLVSEYQQYQEA 428
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 281 bits (688), Expect = 3e-76
Identities = 127/135 (94%), Positives = 134/135 (99%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
FDAKNMMAACDPRHGRYLTVA +FRGRMSM+EVD+QMMN+QNKNSSYFVEWIPNNVKTAV
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAV 353
Query: 190 CDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 369
CDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 354 CDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 370 HMNDLISEYQQYQEA 414
+MNDL+SEYQQYQEA
Sbjct: 414 NMNDLVSEYQQYQEA 428
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 280 bits (686), Expect = 5e-76
Identities = 127/135 (94%), Positives = 134/135 (99%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
FDAKNMMAACDPRHGRYLTVA +FRGRMSM+EVDEQM+++QNKNSSYFVEWIPNNVKTAV
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAV 353
Query: 190 CDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 369
CDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 354 CDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 370 HMNDLISEYQQYQEA 414
+MNDLISEYQQYQEA
Sbjct: 414 NMNDLISEYQQYQEA 428
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 155 bits (377), Expect = 1e-38
Identities = 73/133 (54%), Positives = 102/133 (76%)
Frame = +1
Query: 13 DAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVC 192
DAKN+M C+ G++L+ A I+RG+ + K+ EQ+++++N++ S +E +P + T VC
Sbjct: 294 DAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVC 352
Query: 193 DIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESH 372
DIP RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+AE+
Sbjct: 353 DIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENK 409
Query: 373 MNDLISEYQQYQE 411
+NDLISE+QQY++
Sbjct: 410 VNDLISEFQQYEK 422
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 155 bits (377), Expect = 1e-38
Identities = 73/133 (54%), Positives = 102/133 (76%)
Frame = +1
Query: 13 DAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVC 192
DAKN+M C+ G++L+ A I+RG+ + K+ EQ+++++N++ S +E +P + T VC
Sbjct: 294 DAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVC 352
Query: 193 DIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESH 372
DIP RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+AE+
Sbjct: 353 DIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENK 409
Query: 373 MNDLISEYQQYQE 411
+NDLISE+QQY++
Sbjct: 410 VNDLISEFQQYEK 422
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 110 bits (264), Expect = 6e-25
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K +
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
Query: 190 CDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 356 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 346 MEFTEAESHMNDLISEYQQ 402
EF+EA + L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 110 bits (264), Expect = 6e-25
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K +
Sbjct: 295 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 354
Query: 190 CDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 355 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 414
Query: 346 MEFTEAESHMNDLISEYQQ 402
EF+EA + L +Y++
Sbjct: 415 GEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 110 bits (264), Expect = 6e-25
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K +
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
Query: 190 CDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 356 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 346 MEFTEAESHMNDLISEYQQ 402
EF+EA + L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 110 bits (264), Expect = 6e-25
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K +
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
Query: 190 CDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 356 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 346 MEFTEAESHMNDLISEYQQ 402
EF+EA + L +Y++
Sbjct: 416 GEFSEAREDLAALEKDYEE 434
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 108 bits (259), Expect = 3e-24
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
Query: 190 CDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 346 MEFTEAESHMNDLISEYQQ 402
EFTEA + L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 108 bits (259), Expect = 3e-24
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
Query: 190 CDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 346 MEFTEAESHMNDLISEYQQ 402
EFTEA + L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 108 bits (259), Expect = 3e-24
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
Query: 190 CDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 346 MEFTEAESHMNDLISEYQQ 402
EFTEA + L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 108 bits (259), Expect = 3e-24
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
Query: 190 CDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 346 MEFTEAESHMNDLISEYQQ 402
EFTEA + L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 107 bits (258), Expect = 3e-24
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+A N M CDP+HG+Y+ V ++RG + K+V + +I+ + S FV+W P K +
Sbjct: 291 FEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGL 350
Query: 190 CDIPPRGLK--------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E ++R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 351 NYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEE 410
Query: 346 MEFTEAESHMNDLISEYQQ 402
EF+EA + L +Y++
Sbjct: 411 GEFSEAREDLAALEKDYEE 429
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 107 bits (257), Expect = 5e-24
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ + M CDPR+G+Y+ ++RG + KE++ + I+ K + FV+W P K +
Sbjct: 296 FEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGI 355
Query: 190 CDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP L+ A + N+TAIQE + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 356 NYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 415
Query: 346 MEFTEAESHMNDLISEYQQ 402
EF+EA M L +Y++
Sbjct: 416 GEFSEAREDMAALEKDYEE 434
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 106 bits (255), Expect = 8e-24
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K +
Sbjct: 294 FEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGI 353
Query: 190 CDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 346 MEFTEAESHMNDLISEYQQ 402
EFTEA + L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 106 bits (255), Expect = 8e-24
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K +
Sbjct: 294 FEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGI 353
Query: 190 CDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 354 NYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEE 413
Query: 346 MEFTEAESHMNDLISEYQQ 402
EFTEA + L +Y++
Sbjct: 414 GEFTEAREDLAALEKDYEE 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 102 bits (244), Expect = 2e-22
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ M CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K +
Sbjct: 302 FEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGI 361
Query: 190 CDIPPRGLK--------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + + I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 362 NYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 421
Query: 346 MEFTEAESHMNDLISEYQQYQE 411
EF+EA M L +Y++ E
Sbjct: 422 GEFSEAREDMAALEKDYEEIGE 443
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 102 bits (244), Expect = 2e-22
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ M CDPR G+Y+ ++RG + K+V+ + +++ K S FV+W P K +
Sbjct: 301 FEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGI 360
Query: 190 CDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP L+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 361 NYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 420
Query: 346 MEFTEAESHMNDLISEYQQ 402
EF+EA + L +Y++
Sbjct: 421 GEFSEAREDLAALEKDYEE 439
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 102 bits (244), Expect = 2e-22
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ M CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K +
Sbjct: 274 FEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGI 333
Query: 190 CDIPPRGLK--------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
PP + + I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 334 NYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 393
Query: 346 MEFTEAESHMNDLISEYQQYQE 411
EF+EA M L +Y++ E
Sbjct: 394 GEFSEAREDMAALEKDYEEIGE 415
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 94.3 bits (224), Expect = 4e-20
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Frame = +1
Query: 10 FDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV 189
F+ N M CDP G+Y+ V ++RG + K+V+ + +++ K FV+W P K +
Sbjct: 299 FEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGI 358
Query: 190 ---CDIPPRG-----LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 345
I G + A + N+TAI E + R+ +F M+ ++AF+HW+ GEGM+E
Sbjct: 359 NYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEE 418
Query: 346 MEFTEAESHMNDLISEYQQ 402
EF EA + L +Y +
Sbjct: 419 GEFMEARDDLAALEKDYAE 437
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 60.9 bits (141), Expect = 5e-10
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +1
Query: 232 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLISEYQQ 402
+ ++TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA + L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/63 (20%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 214 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESH-MNDLIS 390
K++ + NST++ LF+ + ++ + ++AF+ + ++ + H + DL+
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKFEKIDNFSLDMMDDAMHIVQDLLD 429
Query: 391 EYQ 399
EY+
Sbjct: 430 EYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/63 (20%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 214 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESH-MNDLIS 390
K++ + NST++ LF+ + ++ + ++AF+ + ++ + H + DL+
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKFEKIDNFSLDMMDDAMHIVQDLLD 429
Query: 391 EYQ 399
EY+
Sbjct: 430 EYK 432
>AC006708-7|ABM01863.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A7A.21 protein.
Length = 168
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 200 GMSHTAVFTLFGIHSTKYDEFLFWMFIICSSTSFM 96
G S + +F I+ T+ DE++FW + SS SF+
Sbjct: 64 GSSVFLLCDVFNINETEPDEWVFWESVFISSFSFL 98
>Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical
protein K08E4.5 protein.
Length = 357
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -2
Query: 254 WMAVELPMKVAAIFSPRGGMSHTAVFTLFGIHSTKYDEFLFWMFIICSSTSF 99
++ V +P+ + + + + M + T+ I+S Y +LFW+ II STSF
Sbjct: 212 FVEVLVPIALCTVCALKLKMITKEISTVISINSVNY--YLFWISIIHFSTSF 261
>L11247-1|AAA28010.2| 484|Caenorhabditis elegans Hypothetical
protein F09G8.5 protein.
Length = 484
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 368 LSASVNSISSMPSPVYQCKNALRLNIAVNCSE 273
LS SVN + S+ +P+ CKN + + NC E
Sbjct: 145 LSLSVNEVKSL-APLQHCKNLKEVYLRKNCLE 175
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -2
Query: 302 RLNIAVNCSEMRLNSSWMAVELPMKVAAIFSPR 204
R N N ++++ S+ ++VE+P K+A +P+
Sbjct: 117 RTNTVDNLEKIKIESNGVSVEIPFKIARYTAPK 149
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Frame = +1
Query: 190 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 345
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 346 MEFTEAE 366
E+ + E
Sbjct: 743 EEWNDEE 749
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Frame = +1
Query: 190 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 345
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 346 MEFTEAE 366
E+ + E
Sbjct: 743 EEWNDEE 749
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Frame = +3
Query: 117 DDEHPEQELVVLRGMDPEQREDRRVRHPAPRTE------DGGDLHR 236
D +HP+Q L V E + +++ P P +E D GDLH+
Sbjct: 449 DMKHPQQNLPVFETSSEETIKYGQIKSPTPGSENIGKVIDEGDLHK 494
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Frame = +1
Query: 190 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 345
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 346 MEFTEAE 366
E+ + E
Sbjct: 743 EEWNDEE 749
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,442,820
Number of Sequences: 27780
Number of extensions: 170989
Number of successful extensions: 678
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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