Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_O08
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   5.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   5.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   5.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.6  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 195 HPAPRTEDGGDLHRQLDCHP 254
           +P+P  + G D+    D HP
Sbjct: 75  YPSPMVDFGYDISNYTDVHP 94


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 195 HPAPRTEDGGDLHRQLDCHP 254
           +P+P  + G D+    D HP
Sbjct: 75  YPSPMVDFGYDISNYTDVHP 94


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -3

Query: 487 LTKESSRVSL---LALVPRRTRGLHRW 416
           LT E+ + +L   L LVP  T   H+W
Sbjct: 103 LTAEAKKQNLKVILDLVPNHTSDQHKW 129


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 231 HRQLDCHPGAVQAHLGTVHR 290
           HR +D   G V A   TVHR
Sbjct: 281 HRSIDVKDGIVLATGITVHR 300


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 231 HRQLDCHPGAVQAHLGTVHR 290
           HR +D   G V A   TVHR
Sbjct: 281 HRSIDVKDGIVLATGITVHR 300


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,892
Number of Sequences: 438
Number of extensions: 2046
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)