Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O07
(417 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 253 9e-69
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 252 1e-68
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 252 1e-68
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 138 4e-34
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 136 1e-33
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 84 1e-17
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 48 6e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 43 2e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 38 8e-04
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 33 0.018
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 32 0.031
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.13
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.22
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.29
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 0.67
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 0.67
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 27 1.2
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 1.5
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 27 1.5
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 2.0
SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subun... 26 2.7
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 26 2.7
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 3.6
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 25 4.7
SPAC4C5.01 |||haloacid dehalogenase-like hydrolase |Schizosaccha... 25 4.7
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 4.7
SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex s... 25 6.2
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 24 8.2
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 253 bits (619), Expect = 9e-69
Identities = 118/129 (91%), Positives = 123/129 (95%)
Frame = +2
Query: 11 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETG 190
TGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET
Sbjct: 24 TGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETP 83
Query: 191 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 370
KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTREHALLA+TL
Sbjct: 84 KYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTL 143
Query: 371 GVKQLIVGV 397
GVKQLIV V
Sbjct: 144 GVKQLIVAV 152
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 252 bits (618), Expect = 1e-68
Identities = 117/129 (90%), Positives = 123/129 (95%)
Frame = +2
Query: 11 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETG 190
TGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET
Sbjct: 24 TGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETP 83
Query: 191 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 370
KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TL
Sbjct: 84 KYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTL 143
Query: 371 GVKQLIVGV 397
GVKQLIV V
Sbjct: 144 GVKQLIVAV 152
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 252 bits (618), Expect = 1e-68
Identities = 117/129 (90%), Positives = 123/129 (95%)
Frame = +2
Query: 11 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETG 190
TGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET
Sbjct: 24 TGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETP 83
Query: 191 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 370
KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TL
Sbjct: 84 KYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTL 143
Query: 371 GVKQLIVGV 397
GVKQLIV V
Sbjct: 144 GVKQLIVAV 152
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 138 bits (333), Expect = 4e-34
Identities = 61/126 (48%), Positives = 88/126 (69%)
Frame = +2
Query: 14 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGK 193
G++++ G +DKRT+EK E+EA+E GK S+ +W LD ERE+G T+++ FET
Sbjct: 256 GNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEH 315
Query: 194 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 373
+++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQTREHA+LA T G
Sbjct: 316 RRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQG 375
Query: 374 VKQLIV 391
+ L+V
Sbjct: 376 INHLVV 381
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 136 bits (330), Expect = 1e-33
Identities = 63/128 (49%), Positives = 84/128 (65%)
Frame = +2
Query: 14 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGK 193
G ++++ G I+ R+++K EA GKGSF YAW+LD + ER RG+T+D+A FE+ K
Sbjct: 195 GRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDK 254
Query: 194 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 373
I DAPGHRDFI MI G S AD AVL+V + FE G +NGQTREHA L LG
Sbjct: 255 KIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALG 314
Query: 374 VKQLIVGV 397
+ +++V V
Sbjct: 315 ISEIVVSV 322
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 83.8 bits (198), Expect = 1e-17
Identities = 44/103 (42%), Positives = 63/103 (61%)
Frame = +2
Query: 83 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 262
++G+ SF +DK E+ RGITI A ++ET + +D PGH D+IKNMITG +
Sbjct: 79 DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138
Query: 263 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 391
D A+++V+A G+ QTREH LLA +GVKQ++V
Sbjct: 139 TMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVV 174
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 48.0 bits (109), Expect = 6e-07
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +2
Query: 116 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 295
V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126
Query: 296 GTG 304
G
Sbjct: 127 SAG 129
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 43.2 bits (97), Expect = 2e-05
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 119 LDKLKAERERGITIDIA----LWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 286
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 287 VAAGTG 304
V A G
Sbjct: 155 VDASQG 160
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 37.5 bits (83), Expect = 8e-04
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 89 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETGKYYVTIIDAPGHRDFIKNMITGTS 262
GK + A+ + + GIT I + F+ G ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 263 QADCAVLIVAAGTG 304
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 33.1 bits (72), Expect = 0.018
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 194 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 349
Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 145 YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 32.3 bits (70), Expect = 0.031
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 197 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 376
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 377 KQLIV 391
K +I+
Sbjct: 163 KHIII 167
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.13
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 194 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 304
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.22
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 206 IIDAPGHRDFIKNMITGTSQADCAVLIV 289
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.29
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 122 DKLKAER-ERGITIDIALWKFETGKYYV--TIIDAPGHRDFIKN 244
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 0.67
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 194 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 289
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 0.67
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 194 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 289
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 27.1 bits (57), Expect = 1.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 153 IPRSRSAFSLSNTQAYLKEPLPISWASFSNFSMVRLSIPPH 31
IP+ A S+ N++ + ++ LP + S V+L +P H
Sbjct: 173 IPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 1.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 209 IDAPGHRDFIKNMITGTSQADCAVLIV 289
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 26.6 bits (56), Expect = 1.5
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 98 SFK-YAWVLDKLKA-ERERGITID-IALWKFETGKYYVTIIDAPGHRDFIKNMIT 253
+FK Y L+ LK E++ G++ID + F+ G + + PG+ DF+ N ++
Sbjct: 3 AFKPYTEALEVLKKYEKKDGLSIDDLIRHNFQGGLTFNDFLILPGYIDFVPNNVS 57
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 2.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 33 AVVSTNVPSKSSRRKPRKWVRVPS 104
A++S + K + +P KWV VPS
Sbjct: 224 ALISNGLKVKETSEEPEKWVVVPS 247
>SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subunit
Rpb11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 123
Score = 25.8 bits (54), Expect = 2.7
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 280 HGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELP 173
+ AV DH L + ++ + D ++FAG+++P
Sbjct: 28 NAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVP 63
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 2.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 183 SNFQRAISMVIPRSRSAFSLSNTQAYLKEPLPISWASFSNFSMV 52
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 3.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 310 EFTSTSGDNKHGAVSLRRSSDHVLDE 233
+F S+ + K+G + SSD VLDE
Sbjct: 1234 DFVSSKRNGKNGGSFIEESSDTVLDE 1259
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 25.0 bits (52), Expect = 4.7
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -3
Query: 283 KHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPE 170
K G V + + V+DE ++ ++D+G + AG ++ E
Sbjct: 236 KRGIVIVNTARGAVMDEAALVEALDEGIVYSAGLDVFE 273
>SPAC4C5.01 |||haloacid dehalogenase-like hydrolase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 246
Score = 25.0 bits (52), Expect = 4.7
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = -3
Query: 415 VESIVGYSYNQLLDSECESEQSV 347
++++VG N+++DS+CE+ S+
Sbjct: 208 IKNLVGDQLNEIVDSQCETLPSL 230
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 4.7
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 154 HHRY-CSLEVRNRQILCHHH 210
HH++ C L V+N+++ H H
Sbjct: 196 HHKFFCDLCVKNKKVFTHEH 215
>SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex
subunit Arc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 24.6 bits (51), Expect = 6.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 174 QRAISMVIPRSRSAFSLSNTQAYLKEPLPISWASFSN 64
Q A+S +IP++RSA N LK L S+ + N
Sbjct: 33 QAAVSQLIPQARSAIQTGNALQGLKTLL--SYVPYGN 67
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 24.2 bits (50), Expect = 8.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 220 WTQRFHQEHDHWN 258
W Q F Q+H +WN
Sbjct: 258 WQQSFLQDHGYWN 270
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,809,392
Number of Sequences: 5004
Number of extensions: 36634
Number of successful extensions: 139
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 146319408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -