Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O07
(417 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 260 2e-70
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 260 2e-70
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 258 9e-70
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 200 3e-52
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 163 5e-41
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 163 5e-41
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 142 9e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 93 6e-20
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 79 1e-15
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 79 1e-15
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 73 8e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 73 8e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 73 8e-14
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 9e-07
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 39 0.001
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 38 0.002
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 37 0.005
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.11
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 0.19
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 0.19
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.44
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.78
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 0.78
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.78
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.0
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.0
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 29 1.4
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.1
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 3.1
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 3.1
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 3.1
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 27 5.5
CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical ... 27 7.2
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 27 7.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 26 9.5
J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein ( C.ele... 26 9.5
AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kina... 26 9.5
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 260 bits (638), Expect = 2e-70
Identities = 122/127 (96%), Positives = 124/127 (97%)
Frame = +2
Query: 11 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETG 190
TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET
Sbjct: 24 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETA 83
Query: 191 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 370
KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TL
Sbjct: 84 KYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTL 143
Query: 371 GVKQLIV 391
GVKQLIV
Sbjct: 144 GVKQLIV 150
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 260 bits (638), Expect = 2e-70
Identities = 122/127 (96%), Positives = 124/127 (97%)
Frame = +2
Query: 11 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETG 190
TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET
Sbjct: 24 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETA 83
Query: 191 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 370
KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TL
Sbjct: 84 KYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTL 143
Query: 371 GVKQLIV 391
GVKQLIV
Sbjct: 144 GVKQLIV 150
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 258 bits (633), Expect = 9e-70
Identities = 120/126 (95%), Positives = 123/126 (97%)
Frame = +2
Query: 11 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETG 190
TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET
Sbjct: 24 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETA 83
Query: 191 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 370
KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TL
Sbjct: 84 KYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTL 143
Query: 371 GVKQLI 388
GVKQL+
Sbjct: 144 GVKQLV 149
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 200 bits (488), Expect = 3e-52
Identities = 91/94 (96%), Positives = 93/94 (98%)
Frame = +2
Query: 11 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETG 190
TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET
Sbjct: 24 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETA 83
Query: 191 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 292
KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 84 KYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 163 bits (396), Expect = 5e-41
Identities = 76/128 (59%), Positives = 93/128 (72%)
Frame = +2
Query: 14 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGK 193
GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FET
Sbjct: 188 GHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSH 247
Query: 194 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 373
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LG
Sbjct: 248 RRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLG 307
Query: 374 VKQLIVGV 397
V QLIV V
Sbjct: 308 VTQLIVAV 315
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 163 bits (396), Expect = 5e-41
Identities = 76/128 (59%), Positives = 93/128 (72%)
Frame = +2
Query: 14 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGK 193
GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FET
Sbjct: 206 GHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSH 265
Query: 194 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 373
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LG
Sbjct: 266 RRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLG 325
Query: 374 VKQLIVGV 397
V QLIV V
Sbjct: 326 VTQLIVAV 333
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 142 bits (344), Expect = 9e-35
Identities = 62/126 (49%), Positives = 90/126 (71%)
Frame = +2
Query: 14 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGK 193
G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ERE+G T+++ FET K
Sbjct: 127 GQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEK 186
Query: 194 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 373
+ TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T G
Sbjct: 187 RHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAG 246
Query: 374 VKQLIV 391
VK L++
Sbjct: 247 VKHLVI 252
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 93.5 bits (222), Expect = 6e-20
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +2
Query: 11 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 142
TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 24 TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 79.0 bits (186), Expect = 1e-15
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = +2
Query: 119 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 298
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 299 TGEFEAGISKNGQTREHALLAFTLGVKQLIV 391
G E QT+EH +LA +GVK + +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAI 166
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 79.0 bits (186), Expect = 1e-15
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = +2
Query: 119 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 298
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 299 TGEFEAGISKNGQTREHALLAFTLGVKQLIV 391
G E QT+EH +LA +GVK + +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAI 166
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 72.9 bits (171), Expect = 8e-14
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +2
Query: 119 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 298
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 299 TGEFEAGISKNGQTREHALLAFTLGV 376
G QTREH LLA +GV
Sbjct: 147 DGPMP-------QTREHLLLARQVGV 165
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 72.9 bits (171), Expect = 8e-14
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +2
Query: 119 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 298
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 299 TGEFEAGISKNGQTREHALLAFTLGV 376
G QTREH LLA +GV
Sbjct: 148 DGPMP-------QTREHLLLARQVGV 166
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 72.9 bits (171), Expect = 8e-14
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +2
Query: 119 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 298
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 299 TGEFEAGISKNGQTREHALLAFTLGV 376
G QTREH LLA +GV
Sbjct: 148 DGPMP-------QTREHLLLARQVGV 166
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 49.6 bits (113), Expect = 9e-07
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 116 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 295
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 296 GTG 304
G
Sbjct: 136 NQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.1 bits (87), Expect = 0.001
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 116 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 295
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 296 GTG 304
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 119 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 298
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 299 TG 304
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.1 bits (82), Expect = 0.005
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 89 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 265
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 266 ADCAVLIVAAGTG 304
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.11
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 200 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 379
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 380 QLIV 391
++I+
Sbjct: 127 RVII 130
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 119 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 289
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 119 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 289
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.19
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 122 DKLKAERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 286
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 287 VAAGTG 304
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.19
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 122 DKLKAERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 286
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 287 VAAGTG 304
V A G
Sbjct: 107 VDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 197 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 292
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.78
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 220 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 131
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 29.9 bits (64), Expect = 0.78
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 155 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 304
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.78
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 206 IIDAPGHRDFIKNMITGTSQADCAVLIV 289
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 155 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 304
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 44 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 145
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 44 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 145
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 393 PTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTA 274
PT+SC+ AS S P PA N VP AT+S +
Sbjct: 16 PTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 173 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 295
++ E G+ V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 113 WVLDKLKAERERGITIDIALWKFETGKYYVTII 211
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 289 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 158
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 289 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 158
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 113 WVLDKLKAERERGITIDIALWKFETGKYYVTII 211
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 113 WVLDKLKAERERGITIDIALWKFETGKYYVTII 211
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 289 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 158
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 289 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 158
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 393 PTISCLTPSVKASRACSRVCPFFE--IPASNSPVPAATISTA 274
PT+ +TPS K S + R P + P PA+T +TA
Sbjct: 270 PTLPPMTPSSKRSSSAKRDAPLQQSSTPQQRLKTPASTTTTA 311
>CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical
protein C50E10.1 protein.
Length = 122
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 372 PSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMF 241
P+ ++ ++ F+ IP+ N P +AT ST+ ++P I F
Sbjct: 43 PTSPSTDIGEQMASFWNIPSPNPPATSATSSTSPEE-EIPCICF 85
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 316 GFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAG 185
GF FT+ D KH + + S+ +LDE+ + DG + + G
Sbjct: 74 GFTFTNEYPDQKHINIERQNYSNALLDELGI-----DGKMAYIG 112
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/57 (19%), Positives = 27/57 (47%)
Frame = +2
Query: 200 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 370
+ +ID PGH I+ ++ ++ D A+ +++ + G+ G ++ +L
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAI-VISESAKKVRKGLKSMGVDENSPIVEMSL 129
>J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein (
C.elegans casein kinaseII-alpha gene, complete cds. ).
Length = 360
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 151 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 252
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
>AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kinase
protein 3 protein.
Length = 360
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 151 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 252
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,064,394
Number of Sequences: 27780
Number of extensions: 207560
Number of successful extensions: 785
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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