Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O06
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical pr... 79 8e-16
Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical pr... 53 8e-08
AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical ... 47 4e-06
Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical pr... 43 7e-05
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 34 0.040
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 34 0.040
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 34 0.040
AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical... 30 0.65
AF021905-1|AAB84394.1| 358|Caenorhabditis elegans presenilin pr... 28 2.6
AF000265-8|AAB52948.1| 358|Caenorhabditis elegans Homolog of pr... 28 2.6
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 27 4.6
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 27 4.6
AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical ... 27 6.1
Z81142-3|CAB03505.1| 491|Caenorhabditis elegans Hypothetical pr... 26 8.1
AF101318-1|AAC69342.2| 356|Caenorhabditis elegans Hypothetical ... 26 8.1
>Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical
protein C37E2.1 protein.
Length = 379
Score = 79.4 bits (187), Expect = 8e-16
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Frame = +1
Query: 73 LISRNVFRALVQGSQHIG--NGVHTSSVNTERNQPNATKEGRIKCTLIPGDGVGPELVYS 246
++SR V Q +G N + + +P ++K T+IPGDGVGPEL+Y+
Sbjct: 1 MLSRTVSSLSRVAPQTLGAVNAASSRQYSITAPRPPTELNQKLKVTIIPGDGVGPELIYT 60
Query: 247 VQEVFKASSIPVDFESFFFSEVNPTLSAPLEDVVNSIAK-NKICIKG 384
VQ++ K + IP++FE F SEV+ T S+ +E+ V SI + N + +KG
Sbjct: 61 VQDIVKQTGIPIEFEEIFLSEVHYTRSSSIENAVESIGRNNNVALKG 107
>Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical
protein F35G12.2 protein.
Length = 396
Score = 52.8 bits (121), Expect = 8e-08
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +1
Query: 166 QPNATK----EGRIKCTLIPGDGVGPELVYSVQEVFKASSIPVDFESFFFSEVNPTLSAP 333
Q N TK GR T++PGDG+GPE+++ V+ + A PVDFE + S
Sbjct: 39 QTNTTKLARYGGRHNVTVLPGDGIGPEMLHHVERILSAVQAPVDFEVVNLTS-KEDASED 97
Query: 334 LEDVVNSIAKNKICIKG 384
L + + +I +N + +KG
Sbjct: 98 LAEAITAIKRNGVALKG 114
>AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical
protein C30F12.7 protein.
Length = 373
Score = 47.2 bits (107), Expect = 4e-06
Identities = 26/94 (27%), Positives = 46/94 (48%)
Frame = +1
Query: 103 VQGSQHIGNGVHTSSVNTERNQPNATKEGRIKCTLIPGDGVGPELVYSVQEVFKASSIPV 282
+Q + + + T + R P A GR +PGDG+GPE++ ++ +F PV
Sbjct: 7 IQAVRGAASAIRTHQIPGHR-LPLAKYGGRHTVCALPGDGIGPEMIAHIRNIFSFCHAPV 65
Query: 283 DFESFFFSEVNPTLSAPLEDVVNSIAKNKICIKG 384
+FE S + L ++ + +I +N + IKG
Sbjct: 66 NFEEVQVS--SSLLDGDMDAAMLAIERNGVAIKG 97
>Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical
protein F43G9.1 protein.
Length = 358
Score = 43.2 bits (97), Expect = 7e-05
Identities = 16/32 (50%), Positives = 26/32 (81%)
Frame = +1
Query: 196 KCTLIPGDGVGPELVYSVQEVFKASSIPVDFE 291
+ TLIPGDG+GPE+ SVQ++F+A+ P+ ++
Sbjct: 26 RVTLIPGDGIGPEISASVQKIFEAADAPIAWD 57
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 33.9 bits (74), Expect = 0.040
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = -1
Query: 281 TGMLDALKTSCTEYTNSGPTPSP----GIRVHLIRPSFVALG*FLSVFTELVWTPLPMCC 114
+ M+ + +C +++N P G VH+I ALG F VWT P C
Sbjct: 540 SNMVQSYDVACKQWSNMSTAPVDLKRFGHSVHVIGQKLYALGGFNGKMKSDVWTLSPAKC 599
Query: 113 DPCTRARKTFRLISD 69
TR + RLI+D
Sbjct: 600 SSATRPDEC-RLITD 613
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 33.9 bits (74), Expect = 0.040
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = -1
Query: 281 TGMLDALKTSCTEYTNSGPTPSP----GIRVHLIRPSFVALG*FLSVFTELVWTPLPMCC 114
+ M+ + +C +++N P G VH+I ALG F VWT P C
Sbjct: 540 SNMVQSYDVACKQWSNMSTAPVDLKRFGHSVHVIGQKLYALGGFNGKMKSDVWTLSPAKC 599
Query: 113 DPCTRARKTFRLISD 69
TR + RLI+D
Sbjct: 600 SSATRPDEC-RLITD 613
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 33.9 bits (74), Expect = 0.040
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = -1
Query: 281 TGMLDALKTSCTEYTNSGPTPSP----GIRVHLIRPSFVALG*FLSVFTELVWTPLPMCC 114
+ M+ + +C +++N P G VH+I ALG F VWT P C
Sbjct: 540 SNMVQSYDVACKQWSNMSTAPVDLKRFGHSVHVIGQKLYALGGFNGKMKSDVWTLSPAKC 599
Query: 113 DPCTRARKTFRLISD 69
TR + RLI+D
Sbjct: 600 SSATRPDEC-RLITD 613
>AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical
protein Y69A2AR.9 protein.
Length = 300
Score = 29.9 bits (64), Expect = 0.65
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1
Query: 260 KTSCTEYTNSGPTPSPG 210
KTS TE TN GP P PG
Sbjct: 128 KTSTTEKTNPGPAPGPG 144
>AF021905-1|AAB84394.1| 358|Caenorhabditis elegans presenilin
protein.
Length = 358
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +1
Query: 217 DGVGPELVYSV---QEVFKASSIPVDFESFFF 303
+ +G LVYSV Q + +A SIPV +FFF
Sbjct: 94 NSIGILLVYSVFHFQRIAEAQSIPVSVPTFFF 125
>AF000265-8|AAB52948.1| 358|Caenorhabditis elegans Homolog of
presenilin protein 1 protein.
Length = 358
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +1
Query: 217 DGVGPELVYSV---QEVFKASSIPVDFESFFF 303
+ +G LVYSV Q + +A SIPV +FFF
Sbjct: 94 NSIGILLVYSVFHFQRIAEAQSIPVSVPTFFF 125
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 27.1 bits (57), Expect = 4.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 310 LRKRRKTQNQRECLMP*KPPVLNILTQVLRHPPE*GYT*YDLLLSHWVD 164
L KRR+ RE + + V + RHPPE + + SHWV+
Sbjct: 5 LEKRREQLEIREKALKQRMKVEQAVLDSARHPPEDVHQWSEHHTSHWVE 53
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 27.1 bits (57), Expect = 4.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 310 LRKRRKTQNQRECLMP*KPPVLNILTQVLRHPPE*GYT*YDLLLSHWVD 164
L KRR+ RE + + V + RHPPE + + SHWV+
Sbjct: 99 LEKRREQLEIREKALKQRMKVEQAVLDSARHPPEDVHQWSEHHTSHWVE 147
>AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical
protein W06H8.2 protein.
Length = 453
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 314 FTSEKKKDSKSTGMLDALKTSCTEYTNSGPTPSPGIRV 201
F + +K+ STG L LKT+ E+ + G T I +
Sbjct: 230 FDAIRKEIPASTGFLIGLKTNSVEFQSEGTTVDDAIEM 267
>Z81142-3|CAB03505.1| 491|Caenorhabditis elegans Hypothetical
protein ZK1037.6 protein.
Length = 491
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 130 GVHTS--SVNTERNQPNATKEGRIKCTLIPGD 219
GV T+ S+NT N PN T+ K T++ D
Sbjct: 375 GVSTTQQSINTYINAPNNTQSANFKVTVVSAD 406
>AF101318-1|AAC69342.2| 356|Caenorhabditis elegans Hypothetical
protein Y73C8C.4 protein.
Length = 356
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 359 AIELTTSSNGALKVGFTSEKKKDSKSTGMLDALKT 255
+IELTT + T EKK+ SK T + D LKT
Sbjct: 221 SIELTTHEK-TTEAWRTFEKKRWSKPTSVCDELKT 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,548,655
Number of Sequences: 27780
Number of extensions: 203980
Number of successful extensions: 511
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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