Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O05
(396 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 180 1e-46
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 180 1e-46
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 31 0.086
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 27 0.80
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 27 1.1
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.4
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 26 1.8
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 26 1.8
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 26 2.4
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 4.3
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 4.3
SPAC13G7.06 |met16||phosphoadenosine phosphosulfate reductase|Sc... 25 5.6
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 25 5.6
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 24 7.4
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 24 7.4
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 24 7.4
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 180 bits (437), Expect = 1e-46
Identities = 84/129 (65%), Positives = 102/129 (79%)
Frame = +1
Query: 7 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLD 186
GI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRLD
Sbjct: 2 GITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRLD 61
Query: 187 TGNFAWGSECSTRKTRIVDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPL 366
+GNF+WGSE ++KTRI+ V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY + +
Sbjct: 62 SGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILM 121
Query: 367 GRKKGAKLT 393
G KG K T
Sbjct: 122 G-SKGKKAT 129
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 180 bits (437), Expect = 1e-46
Identities = 84/129 (65%), Positives = 102/129 (79%)
Frame = +1
Query: 7 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLD 186
GI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRLD
Sbjct: 2 GITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRLD 61
Query: 187 TGNFAWGSECSTRKTRIVDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPL 366
+GNF+WGSE ++KTRI+ V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY + +
Sbjct: 62 SGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILM 121
Query: 367 GRKKGAKLT 393
G KG K T
Sbjct: 122 G-SKGKKAT 129
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 30.7 bits (66), Expect = 0.086
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 16 RDHWHKRRATGGKRAPIRKKRKY--ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 189
RD +K + G K+ + EL +N + Q+ L+ S T YRA+ LDT
Sbjct: 1083 RDRLYKSQLIGRVLDDTTKENRLLKELASSKSNITIRWQQGGLIGSGSFGTVYRAVNLDT 1142
Query: 190 GNFAWGSECSTRKTRI 237
G+ E + K RI
Sbjct: 1143 GDLMAVKEVALHKPRI 1158
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 0.80
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 106 WQPGDLTHTSSSYEWAHVC 50
W PG SS++W HVC
Sbjct: 278 WSPGKYDVFGSSHQWFHVC 296
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.1 bits (57), Expect = 1.1
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +1
Query: 97 PAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRIVDVVYNASNNELV 276
P NT + PQ RSR T R+L +G + S ++ +TR V +AS+N L+
Sbjct: 530 PLQNTVISPQPTR--RSR---TPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSNSLI 581
Query: 277 RTKTLVKNAIVVVDATPFRQWYE 345
+ ++ V TPF +E
Sbjct: 582 SIISSKPSSSTVQRQTPFHSPFE 604
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 1.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 309 DNSILYQGFGTHQFIVRGIINNI 241
+NS+ +Q F +H FI R +IN I
Sbjct: 541 ENSLYHQSFSSHWFISRLLINPI 563
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.2 bits (55), Expect = 1.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 345 FIPLPERCGIHHDNSILYQ 289
F+P PE C I+H+ I Q
Sbjct: 477 FLPAPEECNIYHNEHIQVQ 495
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 26.2 bits (55), Expect = 1.8
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +1
Query: 19 DHWHKRRATGGKRAPIRKKRKY---ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 189
D W +A G +PIR+ ++Y +L P K H R K R + +
Sbjct: 758 DEWKASKAFGANDSPIRENKRYKHNKLQTPKPADKF-RDNYHKQNKRNREAKERGIGIKV 816
Query: 190 GNFAWGSECSTRKTRIVDVVYNASNN 267
N S RK R + A NN
Sbjct: 817 -NSELKSAVEIRKARELKEKRLAKNN 841
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 25.8 bits (54), Expect = 2.4
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 202 WGSEC--STRKTRIVDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRK 375
WGS+ +K + +V+ +++ + +T L AT F + +S+Y +PL R+
Sbjct: 250 WGSQSYLQEKKAGLAEVLNISTSQQKPKTTALDYEVFRHEMATKFSSFADSYYPVPLDRE 309
Query: 376 K 378
+
Sbjct: 310 Q 310
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.0 bits (52), Expect = 4.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 263 LEAL*TTSTIRVLRVEHSDPHAKFPVSRR 177
LE + T S +V R H DP K P RR
Sbjct: 193 LEGVKTKSGRKVHRPNHFDPLVKLPTRRR 221
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 352 YLLPLGRKKGAKLTE 396
Y+LPLGRK K TE
Sbjct: 492 YILPLGRKTARKCTE 506
>SPAC13G7.06 |met16||phosphoadenosine phosphosulfate
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 266
Score = 24.6 bits (51), Expect = 5.6
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -2
Query: 158 LPPRDLTKWMRWG-PSL 111
L P+D+ KW RW PSL
Sbjct: 32 LSPQDILKWCRWTLPSL 48
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 24.6 bits (51), Expect = 5.6
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 19 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 198
+ W K T K+ +KRK L R A +L + + + S+GG +A + ++
Sbjct: 32 EKWSKGVKTN-KKEQEAEKRKAALERKAERERLEKEEMESLPSKGGKGSKKAAKKNSSLD 90
Query: 199 AWGSE 213
A+ +E
Sbjct: 91 AFLNE 95
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 24.2 bits (50), Expect = 7.4
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 200 AKFPVSRRRA-RYLVLPPRDLTKW 132
AK P+ +RR + L+L RDLT W
Sbjct: 420 AKKPILKRRTPQELLLSGRDLTPW 443
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 24.2 bits (50), Expect = 7.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 204 PCEVSSIKTQGTIFSVTTTGSD 139
P V+SIK GT FS G+D
Sbjct: 768 PTAVASIKVSGTEFSTLLHGND 789
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 24.2 bits (50), Expect = 7.4
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 354 VVAFIPLPERCGIHHDNSI--LYQGFGTHQFIVRGIINN 244
++ F+ L E IH N LY+ F T +++GI++N
Sbjct: 100 LLPFLILEELMDIHTVNECAKLYEYFETRPSLMKGIVSN 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,803,298
Number of Sequences: 5004
Number of extensions: 37261
Number of successful extensions: 92
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 132093910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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