Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_O04
         (424 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   1.1  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   6.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    22   8.0  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          22   8.0  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    22   8.0  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 13  HPGGRGNAGGEHHHRINMDKYH 78
           H GG   A G HHH+ +   +H
Sbjct: 712 HHGGAAAATGHHHHQHHAAPHH 733


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 34  AGGEHHHRINMDKYHPGYFG 93
           A   HHH  +   +HPG  G
Sbjct: 153 AAAMHHHHHHPHHHHPGLTG 172



 Score = 22.2 bits (45), Expect = 8.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 43  HHQHYHVH 20
           HHQH+H H
Sbjct: 118 HHQHHHQH 125


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 127 NKDFCPVLNLDKLWT 171
           N+DF PV+ +D+ +T
Sbjct: 782 NEDFVPVIEIDETFT 796


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 43  HHQHYHVHQD 14
           HH H+H HQ+
Sbjct: 657 HHHHHHHHQN 666


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 10  KHPGGRGNAGGEHHHRINMDKYHPGY 87
           K    RGNA  EH  R+N+   + G+
Sbjct: 131 KSTNARGNAVLEHFSRLNLVLVNVGF 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,821
Number of Sequences: 2352
Number of extensions: 7927
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)