Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O04
(424 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical ... 158 2e-39
AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical ... 88 3e-18
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 30 0.79
AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin... 29 1.4
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 29 1.8
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 29 1.8
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 28 2.4
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 28 2.4
U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical pr... 27 4.2
U39652-3|AAA80402.1| 90|Caenorhabditis elegans Hypothetical pr... 27 4.2
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 27 5.5
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 27 5.5
AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical ... 27 5.5
Z68751-6|CAA92976.1| 202|Caenorhabditis elegans Hypothetical pr... 27 7.3
AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical ... 27 7.3
AF040642-10|AAB94949.2| 576|Caenorhabditis elegans Hypothetical... 27 7.3
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 7.3
AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical ... 23 8.3
AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical ... 23 8.3
Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 26 9.7
AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf gro... 26 9.7
>AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical
protein Y37E3.8a protein.
Length = 145
Score = 158 bits (383), Expect = 2e-39
Identities = 70/122 (57%), Positives = 88/122 (72%)
Frame = +1
Query: 10 KHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQA 189
KHPGGRGNAGG+HHHRIN DKYHPGYFGK+GMR +H+ +N+ +CP +N+++LW+LV ++
Sbjct: 27 KHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRVFHLNKNQHYCPTVNVERLWSLVPQEV 86
Query: 190 RLKYASATDGKVPVINIVKAXXXXXXXXXXXPKQPVIVKAKFFSKTAEQKIKAVGGVCVL 369
R K AT GK PVI+ K P+ P+IVKA+FFS AEQKIK GG CVL
Sbjct: 87 RDK---ATGGKSPVIDCTKLGYFKVLGKGLLPETPLIVKARFFSHEAEQKIKKAGGACVL 143
Query: 370 SA 375
A
Sbjct: 144 VA 145
>AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical
protein Y37E3.8b protein.
Length = 88
Score = 87.8 bits (208), Expect = 3e-18
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = +1
Query: 103 MRNYHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXX 282
MR +H+ +N+ +CP +N+++LW+LV ++ R K AT GK PVI+ K
Sbjct: 1 MRVFHLNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLL 57
Query: 283 PKQPVIVKAKFFSKTAEQKIKAVGGVCVLSA 375
P+ P+IVKA+FFS AEQKIK GG CVL A
Sbjct: 58 PETPLIVKARFFSHEAEQKIKKAGGACVLVA 88
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 29.9 bits (64), Expect = 0.79
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 7 GKHPGGRGNAGGEHHHRINMDKYHPG 84
G H G G GG HHH YH G
Sbjct: 184 GSHHHGGGGGGGGHHHHGGGGHYHGG 209
>AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin
protein 3 protein.
Length = 409
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/49 (24%), Positives = 20/49 (40%)
Frame = -1
Query: 196 LVLPAQRPESTVCQDLKQGRNPCFFSCGNFSYQVCQSTQGGTCPC*FCD 50
L P P S VC+ +PC+++ N+ Y + T C+
Sbjct: 130 LSAPCTEPRSYVCETPSTHEDPCYYNYNNYCYTFSHNQSSFTTAQAICE 178
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 7 GKHPGGRGNAGGEHHH 54
G GGRG AGG HHH
Sbjct: 111 GGPAGGRGGAGGFHHH 126
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 7 GKHPGGRGNAGGEHHH 54
G GGRG AGG HHH
Sbjct: 111 GGPAGGRGGAGGFHHH 126
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 4 RGKHPGGRGNAGGEHH-HRINMDKYHPGYFGKLGMRNYHMRRN 129
RG H GGR N G + H N + G G RN + R N
Sbjct: 225 RGNHGGGRRNYGNQRSLHTNNNESGQHSQNGHSGHRNVYSRGN 267
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 4 RGKHPGGRGNAGGEHH-HRINMDKYHPGYFGKLGMRNYHMRRN 129
RG H GGR N G + H N + G G RN + R N
Sbjct: 225 RGNHGGGRRNYGNQRSLHTNNNESGQHSQNGHSGHRNVYSRGN 267
>U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical
protein T04G9.6 protein.
Length = 601
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 67 DKYHPGYFGKLGMRNYHMRRN 129
D YH YFGK G YH+ RN
Sbjct: 405 DNYHNRYFGKAG---YHLTRN 422
>U39652-3|AAA80402.1| 90|Caenorhabditis elegans Hypothetical
protein R07E4.3 protein.
Length = 90
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 1 ARGKHPGGRGNAGGEHHHRI--NMDKYHPGYFGKLGMRNY 114
A GKH G G GEH + N K + G+F + +R +
Sbjct: 7 AMGKHFGNLGKMYGEHRFALAPNEQKAYKGFFDQAFVRTF 46
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +1
Query: 28 GNAGGEHHHRINMDKYHPGYF-----GKLGMRN-YHMRRNKDFCPVLNLDKLW 168
G+ G E HH D YHP F +L + N Y +NK +C D+L+
Sbjct: 282 GDIGVECHHHSTTDTYHPNCFRCETCRQLLVDNIYFFYKNKYYCGRHYADQLY 334
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 19 GGRGNAGGEHHHRINMDKYHPG 84
G RG GG H+ RI + +H G
Sbjct: 23 GRRGGGGGMHNQRIQQNPHHGG 44
>AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical
protein B0041.2a protein.
Length = 706
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 19 GGRGNAGGEHHHRINMDKYHPG 84
G RG GG H+ RI + +H G
Sbjct: 23 GRRGGGGGMHNQRIQQNPHHGG 44
>Z68751-6|CAA92976.1| 202|Caenorhabditis elegans Hypothetical
protein T05E11.8 protein.
Length = 202
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 7 GKHPGGRGNAGGEHHHRINMDK 72
G+H G +G GG+H + N DK
Sbjct: 162 GRHGGRKGGKGGKHFGKKNGDK 183
>AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical
protein Y67A10A.11 protein.
Length = 292
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = -1
Query: 118 CGNFSY-QVCQSTQGGTCPC 62
C +Y + C STQ G CPC
Sbjct: 45 CSQINYSRTCLSTQMGNCPC 64
>AF040642-10|AAB94949.2| 576|Caenorhabditis elegans Hypothetical
protein C50D2.1 protein.
Length = 576
Score = 26.6 bits (56), Expect = 7.3
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1
Query: 28 GNAGGEHHHRINMDKYHPGYFGKLGMRNY 114
G+ G HH +++ + GY LG+R++
Sbjct: 398 GSIGNGHHGKVDFGTWGGGYSDNLGVRDF 426
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 130 CFFSCGNFSYQVCQSTQGGTCP 65
C FS N Y C + QG CP
Sbjct: 946 CRFSQSNHKYYCCGNIQGSMCP 967
>AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3a protein.
Length = 426
Score = 23.4 bits (48), Expect(2) = 8.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 58 FCDGAHHQHYHVH 20
+ DG HH H H H
Sbjct: 410 YYDGGHHHHRHHH 422
Score = 21.4 bits (43), Expect(2) = 8.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 43 HHQHYHVHQD 14
HH+H+H H D
Sbjct: 417 HHRHHHHHCD 426
>AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3b protein.
Length = 426
Score = 23.4 bits (48), Expect(2) = 8.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 58 FCDGAHHQHYHVH 20
+ DG HH H H H
Sbjct: 410 YYDGGHHHHRHHH 422
Score = 21.4 bits (43), Expect(2) = 8.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 43 HHQHYHVHQD 14
HH+H+H H D
Sbjct: 417 HHRHHHHHCD 426
>Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical
protein F28C6.4b protein.
Length = 689
Score = 26.2 bits (55), Expect = 9.7
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = -3
Query: 242 TMLITGTLPSVADAYFSLACSETRVHS-LSRF-KTGQKSLFL--LMW*FLIP-SLPKYPG 78
T +TGTLPS +LA +E + + +SR K G+K F W L+P S K+ G
Sbjct: 105 TAYLTGTLPSFGTVLTNLATAEMKTANWISRIQKIGKKVHFFGDDTWIRLLPRSFEKFEG 164
>Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical
protein F28C6.4a protein.
Length = 745
Score = 26.2 bits (55), Expect = 9.7
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = -3
Query: 242 TMLITGTLPSVADAYFSLACSETRVHS-LSRF-KTGQKSLFL--LMW*FLIP-SLPKYPG 78
T +TGTLPS +LA +E + + +SR K G+K F W L+P S K+ G
Sbjct: 105 TAYLTGTLPSFGTVLTNLATAEMKTANWISRIQKIGKKVHFFGDDTWIRLLPRSFEKFEG 164
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 169 STVCQDLKQGRNPCFFSCGNFSYQVCQS 86
S VCQ + + C SC +VCQS
Sbjct: 106 SNVCQQKQYSSSQCASSCNRSCSRVCQS 133
>AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf growth
factor relatedprotein 1 protein.
Length = 304
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 4 RGKHPGGRGNAGGEHHHR 57
R H G RG+ G HHHR
Sbjct: 265 RQHHGGPRGHHGHRHHHR 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,490,062
Number of Sequences: 27780
Number of extensions: 163508
Number of successful extensions: 607
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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