Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O03
(398 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 0.97
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 22 3.0
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 3.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 3.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 3.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 3.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 5.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 5.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 5.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 5.2
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 5.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 5.2
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 9.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 9.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 9.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 9.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 9.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 9.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 9.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 9.1
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.4 bits (48), Expect = 0.97
Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 109 YEKEAEQQKNRVQKIKDEGQD--EHNIRKQEEVLQESLMMVPDCQRRL 246
YE+ +E+ R+ EG+D ++ R E+ ++ ++ + +RL
Sbjct: 349 YEQPSEEDLKRITNQPSEGEDISDYKFRHITEITILTVQLIVEFSKRL 396
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 299 LRFCSVSNMFLRSVNAFANL 240
L C V N+ RSVN F ++
Sbjct: 12 LIMCGVQNLRARSVNIFQDI 31
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 286 EQNLKEHEDYIAAEQVLKEAEPHLP 360
+ L + Y EQV + EPH P
Sbjct: 96 DNKLASNAGYNVIEQVRTKEEPHAP 120
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 286 EQNLKEHEDYIAAEQVLKEAEPHLP 360
+ L + Y EQV + EPH P
Sbjct: 96 DNKLASNAGYNVIEQVRTKEEPHAP 120
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 286 EQNLKEHEDYIAAEQVLKEAEPHLP 360
+ L + Y EQV + EPH P
Sbjct: 96 DNKLASNAGYNVIEQVRTKEEPHAP 120
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIAAEQVLKEAEPHLPEIITS*ESL 387
++KN+L +KEH+ + ++++E + TS SL
Sbjct: 167 EIKNVLTKINKIKEHDTVLVVN--IEKSENESKKYATSSNSL 206
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -2
Query: 205 EVPPPAF*CYARLGPRPLFSVLYFSAVQPPFRKL 104
++P P Y PRP+ S + P FR +
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHI 144
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -2
Query: 205 EVPPPAF*CYARLGPRPLFSVLYFSAVQPPFRKL 104
++P P Y PRP+ S + P FR +
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHI 144
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -2
Query: 205 EVPPPAF*CYARLGPRPLFSVLYFSAVQPPFRKL 104
++P P Y PRP+ S + P FR +
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHI 144
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -2
Query: 205 EVPPPAF*CYARLGPRPLFSVLYFSAVQPPFRKL 104
++P P Y PRP+ S + P FR +
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHI 144
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -2
Query: 205 EVPPPAF*CYARLGPRPLFSVLYFSAVQPPFRKL 104
++P P Y PRP+ S + P FR +
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHI 144
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -2
Query: 205 EVPPPAF*CYARLGPRPLFSVLYFSAVQPPFRKL 104
++P P Y PRP+ S + P FR +
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHI 144
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIAAEQVLKEAE 348
++KNIL + EH +A E E
Sbjct: 175 EIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIAAEQVLKEAE 348
++KNIL + EH +A E E
Sbjct: 175 EIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIAAEQVLKEAE 348
++KNIL + EH +A E E
Sbjct: 175 EIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIAAEQVLKEAE 348
++KNIL + EH +A E E
Sbjct: 175 EIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIAAEQVLKEAE 348
++KNIL + EH +A E E
Sbjct: 175 EIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIAAEQVLKEAE 348
++KNIL + EH +A E E
Sbjct: 175 EIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIAAEQVLKEAE 348
++KNIL + EH +A E E
Sbjct: 175 EIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIAAEQVLKEAE 348
++KNIL + EH +A E E
Sbjct: 175 EIKNILNKTNEITEHRTVLAVNIEKSENE 203
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,409
Number of Sequences: 438
Number of extensions: 1738
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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