Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_O02
(291 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 22 4.1
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 22 4.1
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 22 4.1
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 21 7.1
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 21 7.1
Y17703-1|CAA76823.1| 111|Anopheles gambiae D7r1 protein protein. 21 9.4
AY045760-1|AAK84942.1| 165|Anopheles gambiae D7-related 1 prote... 21 9.4
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 21 9.4
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 21 9.4
AJ133852-1|CAB39727.1| 165|Anopheles gambiae D7-related 1 prote... 21 9.4
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = -2
Query: 92 VYIPP-VFPRLSSEC*DPSL 36
+YIPP V P S+EC P L
Sbjct: 51 IYIPPPVPPYCSTECKGPRL 70
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -3
Query: 262 MISFIETPERRYEFTKVSDTARTIANGHFELYQTLFSCQTSLQT 131
++ I+T + EF K D R ++ Q +C T +QT
Sbjct: 632 VVETIDTAKACIEFLKQHDIGRASFIALEKIQQYERNCHTQIQT 675
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 241 PERRYEFTKVSDTARTIANGHFE 173
PER+ TK++ + T +NG E
Sbjct: 672 PERKSSLTKLNRSNSTASNGTLE 694
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 241 PERRYEFTKVSDTARTIANGHFELY 167
P Y+ V+ TA A GH +LY
Sbjct: 1171 PIAAYQAPSVAGTATAAAVGHAKLY 1195
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 241 PERRYEFTKVSDTARTIANGHFE 173
PER+ TK++ + T +NG E
Sbjct: 673 PERKSSLTKLNRSNSTASNGTLE 695
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 7/36 (19%)
Frame = -1
Query: 162 RCSAARPRS-------RHRPNIVVSMFPPDSIHTTC 76
RC A RS + I PP S+HT C
Sbjct: 849 RCEATEARSHLADSQVKKEQQITSQALPPHSMHTDC 884
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 137 ERGLAAEQRLVKFKVTVSDRPGGIADLCKLIASLGCLDKRYHS 265
+RG+AAE++ + + +DR + C L K YH+
Sbjct: 199 KRGIAAERKEARLEKQEADRYASLKQECSEKQVHFQLFKLYHN 241
>Y17703-1|CAA76823.1| 111|Anopheles gambiae D7r1 protein protein.
Length = 111
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 194 RPGGIADLCKLIASLGCLDK 253
RP G D KLI L ++K
Sbjct: 68 RPDGTGDYHKLIKPLNAIEK 87
>AY045760-1|AAK84942.1| 165|Anopheles gambiae D7-related 1 protein
protein.
Length = 165
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 194 RPGGIADLCKLIASLGCLDK 253
RP G D KLI L ++K
Sbjct: 68 RPDGTGDYHKLIKPLNAIEK 87
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 89 ILSGGNIDTTILGRCLERGLAAEQRLVKFKVTV 187
+ G N T CLE LA E+ +++TV
Sbjct: 161 VCRGANGATAASDACLECFLAVEEHEQPYELTV 193
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 89 ILSGGNIDTTILGRCLERGLAAEQRLVKFKVTV 187
+ G N T CLE LA E+ +++TV
Sbjct: 161 VCRGANGATAASDACLECFLAVEEHEQPYELTV 193
>AJ133852-1|CAB39727.1| 165|Anopheles gambiae D7-related 1 protein
protein.
Length = 165
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 194 RPGGIADLCKLIASLGCLDK 253
RP G D KLI L ++K
Sbjct: 68 RPDGTGDYHKLIKPLNAIEK 87
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 307,565
Number of Sequences: 2352
Number of extensions: 5030
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17819379
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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