Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_O02
         (291 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC057393-1|AAH57393.1|  693|Homo sapiens MTMR12 protein protein.       27   8.3  
AY028703-1|AAK26171.1|  747|Homo sapiens phosphatidylinositol-3 ...    27   8.3  
AK000483-1|BAA91195.1|  637|Homo sapiens protein ( Homo sapiens ...    27   8.3  
AB051469-1|BAB21773.1|  775|Homo sapiens KIAA1682 protein protein.     27   8.3  

>BC057393-1|AAH57393.1|  693|Homo sapiens MTMR12 protein protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +2

Query: 119 ILGRCLERGLAAEQRLVKFKVTVSDRPGGIADLCKLIASLGCLDKRYHSGTRLG 280
           I+ RCL++ +   + +    + V       +DLC LI+SL  L    H  TR+G
Sbjct: 365 IIRRCLKKAIEITECMEAQNMNVLLLEENASDLCCLISSLVQLMMDPHCRTRIG 418


>AY028703-1|AAK26171.1|  747|Homo sapiens phosphatidylinositol-3
           phosphate 3-phosphatase adaptor subunit protein.
          Length = 747

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +2

Query: 119 ILGRCLERGLAAEQRLVKFKVTVSDRPGGIADLCKLIASLGCLDKRYHSGTRLG 280
           I+ RCL++ +   + +    + V       +DLC LI+SL  L    H  TR+G
Sbjct: 365 IIRRCLKKAIEITECMEAQNMNVLLLEENASDLCCLISSLVQLMMDPHCRTRIG 418


>AK000483-1|BAA91195.1|  637|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20476 fis, clone KAT07209. ).
          Length = 637

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +2

Query: 119 ILGRCLERGLAAEQRLVKFKVTVSDRPGGIADLCKLIASLGCLDKRYHSGTRLG 280
           I+ RCL++ +   + +    + V       +DLC LI+SL  L    H  TR+G
Sbjct: 365 IIRRCLKKAIEITECMEAQNMNVLLLEENASDLCCLISSLVQLMMDPHCRTRIG 418


>AB051469-1|BAB21773.1|  775|Homo sapiens KIAA1682 protein protein.
          Length = 775

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +2

Query: 119 ILGRCLERGLAAEQRLVKFKVTVSDRPGGIADLCKLIASLGCLDKRYHSGTRLG 280
           I+ RCL++ +   + +    + V       +DLC LI+SL  L    H  TR+G
Sbjct: 393 IIRRCLKKAIEITECMEAQNMNVLLLEENASDLCCLISSLVQLMMDPHCRTRIG 446


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,410,966
Number of Sequences: 237096
Number of extensions: 805907
Number of successful extensions: 1710
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)