Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_O02
         (291 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   5.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   7.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   7.1  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    20   7.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   9.4  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 207 IPPGRSLTVTLNFTKRCSAARPRSRHR 127
           +P G  L  +L F+ +    R R+ HR
Sbjct: 188 LPTGELLVHSLEFSDQIHGYRCRTMHR 214


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 207 IPPGRSLTVTLNFTKRCSAARPRSRHR 127
           +P G  L  +L F+ +    R R+ HR
Sbjct: 188 LPTGELLVHSLEFSDQIHGYRCRTMHR 214


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 5/13 (38%), Positives = 7/13 (53%)
 Frame = +3

Query: 129 DVWSEVWQLNSVW 167
           D+W  +W    VW
Sbjct: 135 DLWCSIWLAVDVW 147


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 250 IETPERRYEFTK 215
           +E+P  +YEF+K
Sbjct: 141 LESPRGKYEFSK 152


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 250 IETPERRYEFTK 215
           +E+P  +YEF+K
Sbjct: 156 LESPRGKYEFSK 167


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 250 IETPERRYEFTK 215
           +E+P  +YEF+K
Sbjct: 44  LESPRGKYEFSK 55


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 63  KFRVLRPKPIMAAY 22
           K R +RP+PI A +
Sbjct: 631 KHRAIRPEPIDAQF 644


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,011
Number of Sequences: 438
Number of extensions: 1786
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)