Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_O01
         (385 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    40   5e-04
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    40   8e-04
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    40   8e-04
DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.      37   0.006
AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical ...    37   0.006
U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    32   0.12 
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    32   0.12 
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      32   0.12 
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      32   0.12 
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    32   0.12 
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    32   0.16 
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       32   0.16 
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    32   0.16 
U80839-11|AAB37912.2|  261|Caenorhabditis elegans Hypothetical p...    29   1.1  
U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical pr...    27   4.5  
AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical...    27   6.0  
Z68009-3|CAA92005.1|  817|Caenorhabditis elegans Hypothetical pr...    26   7.9  

>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 40.3 bits (90), Expect = 5e-04
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = +3

Query: 210 GLLSCGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 323
           GL +   L DVTL    + + AH++VLS CSPYF  MF
Sbjct: 48  GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMF 85


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 39.5 bits (88), Expect = 8e-04
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +3

Query: 204 FHGLLSCGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 332
           F+ L S   L DV L  E R L AHK++L+   PYF+ MF ++
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLD 83


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 39.5 bits (88), Expect = 8e-04
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +3

Query: 204 FHGLLSCGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 332
           F+ L S   L DV L  E R L AHK++L+   PYF+ MF ++
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLD 83


>DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.
          Length = 690

 Score = 36.7 bits (81), Expect = 0.006
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 228 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 323
           +L DV L   G +++AH+ +L+  SPYF+ MF
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMF 140


>AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical
           protein W02G9.2 protein.
          Length = 690

 Score = 36.7 bits (81), Expect = 0.006
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 228 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 323
           +L DV L   G +++AH+ +L+  SPYF+ MF
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMF 140


>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 32.3 bits (70), Expect = 0.12
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 186 ANMSAGFHGLLSCGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 326
           ++++     L   G   D TL  E R L+AHK +L+  SP F  M +
Sbjct: 187 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMME 233


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 32.3 bits (70), Expect = 0.12
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 186 ANMSAGFHGLLSCGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 326
           ++++     L   G   D TL  E R L+AHK +L+  SP F  M +
Sbjct: 194 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMME 240


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 32.3 bits (70), Expect = 0.12
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
 Frame = +3

Query: 138 IMASDEQFSLCWNNFHANMSAGFHGLLS-------CGDLVDVTLAAEGRLLQAHKLVLSV 296
           ++AS E   LC   F  +     H L          G   DV +  + +   AH+ +L+ 
Sbjct: 3   LVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNILAA 62

Query: 297 CSPYFQEMFK 326
            SPYF  +FK
Sbjct: 63  HSPYFDAIFK 72


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 32.3 bits (70), Expect = 0.12
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
 Frame = +3

Query: 138 IMASDEQFSLCWNNFHANMSAGFHGLLS-------CGDLVDVTLAAEGRLLQAHKLVLSV 296
           ++AS E   LC   F  +     H L          G   DV +  + +   AH+ +L+ 
Sbjct: 3   LVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNILAA 62

Query: 297 CSPYFQEMFK 326
            SPYF  +FK
Sbjct: 63  HSPYFDAIFK 72


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 32.3 bits (70), Expect = 0.12
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
 Frame = +3

Query: 138 IMASDEQFSLCWNNFHANMSAGFHGLLS-------CGDLVDVTLAAEGRLLQAHKLVLSV 296
           ++AS E   LC   F  +     H L          G   DV +  + +   AH+ +L+ 
Sbjct: 3   LVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNILAA 62

Query: 297 CSPYFQEMFK 326
            SPYF  +FK
Sbjct: 63  HSPYFDAIFK 72


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 31.9 bits (69), Expect = 0.16
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +3

Query: 129 VAAIMASDEQFSLCWNNFHANMSAGFHGLLSCGDLVDVTLAAEGRLLQAHKLVLSVCSPY 308
           V  I  ++E       N    +   +  L S   L D  +   G++++AHK VL+  SP 
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225

Query: 309 FQEMFKMNPT 338
           F  M     T
Sbjct: 226 FNAMLTHQDT 235


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 31.9 bits (69), Expect = 0.16
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +3

Query: 129 VAAIMASDEQFSLCWNNFHANMSAGFHGLLSCGDLVDVTLAAEGRLLQAHKLVLSVCSPY 308
           V  I  ++E       N    +   +  L S   L D  +   G++++AHK VL+  SP 
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225

Query: 309 FQEMFKMNPT 338
           F  M     T
Sbjct: 226 FNAMLTHQDT 235


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.16
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 231 LVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 332
           L DV L  EG+ +   K VL+  S +FQ+MF  N
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSN 192


>U80839-11|AAB37912.2|  261|Caenorhabditis elegans Hypothetical
           protein ZC204.3 protein.
          Length = 261

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 198 AGFHGLLSCGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 326
           A +  + S  +  D  L  E + L  +K  LS+ S YF E+FK
Sbjct: 98  AEYEKMFSESEDTDAVLVVEDKRLHVNKEFLSLHSTYFAELFK 140


>U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical
           protein C10A4.7 protein.
          Length = 192

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 120 VPTVAAIMASDEQFSLCWNNFHANMSAGFHGLLSCGDLVDVTL 248
           + TV  I+       LCW + +AN++A F  LL+ G +   T+
Sbjct: 114 INTVHNIIMGTCGHHLCWEDENANVAAAFILLLASGTITFFTM 156


>AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical
           protein Y62E10A.16 protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 225 GDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 323
           G+  D+ LAA GR  + HKL L   + +F+ MF
Sbjct: 67  GENSDIVLAACGREWRVHKLYLKQ-TKFFESMF 98


>Z68009-3|CAA92005.1|  817|Caenorhabditis elegans Hypothetical
           protein R09A8.3 protein.
          Length = 817

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 228 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 323
           +L D  L  + R +  HK+VL+  SP   +MF
Sbjct: 92  ELCDAVLFVKEREIFVHKVVLAAVSPALLDMF 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,508,318
Number of Sequences: 27780
Number of extensions: 193420
Number of successful extensions: 400
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)