Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_O01
         (385 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      83   8e-19
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          75   2e-16
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   4e-05
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   2.1  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   2.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   4.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   8.6  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 83.4 bits (197), Expect = 8e-19
 Identities = 33/73 (45%), Positives = 51/73 (69%)
 Frame = +3

Query: 141 MASDEQFSLCWNNFHANMSAGFHGLLSCGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEM 320
           M   + F L WNN+ +++++ F  L    D VDVTLA +GR L+AH++VLS CSPYF+E+
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 321 FKMNPTQHPIVLV 359
            K  P +HP++++
Sbjct: 61  LKSTPCKHPVIVL 73


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 75.4 bits (177), Expect = 2e-16
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = +3

Query: 153 EQFSLCWNNFHANMSAGFHGLLSCGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 332
           + + L WNN+ +NM++ FH LL     VDVTLA     L+AHK+VLS CS YFQ++   N
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 333 PTQHPIVLV 359
           P +HP +++
Sbjct: 69  PCKHPTIIM 77


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 37.9 bits (84), Expect = 4e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 141 MASDEQFSLCWNNFHANMSAGFHGLLSCGDLVDVTLAAE 257
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 306 KVNILIKLIYVPVTICLRQPMLRLLNLHTTAGHES-LLTYSRGNCSNIMR 160
           +V +L+++ ++   I   Q    +++       E   L+Y RGN +N++R
Sbjct: 33  RVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIR 82


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 306 KVNILIKLIYVPVTICLRQPMLRLLNLHTTAGHES-LLTYSRGNCSNIMR 160
           +V +L+++ ++   I   Q    +++       E   L+Y RGN +N++R
Sbjct: 33  RVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIR 82


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 127 QSPPSWRRTNNSHYVGTIST 186
           ++P +      +HY+GT++T
Sbjct: 160 ETPKNTSAVRYTHYIGTLAT 179


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 159 FSLCWNNFHA 188
           F +CW  FHA
Sbjct: 294 FFICWAPFHA 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,481
Number of Sequences: 438
Number of extensions: 2724
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)