Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_N21
         (519 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    27   0.15 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.9  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    23   2.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   5.7  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 276 GFEPQQRIKLARMTALWIGNGCVPPSVLLVLVNEH 380
           G +   R  +  ++ +W+G  C+    LL++ NEH
Sbjct: 150 GVKRTPRRMIVYVSLVWLGAACISLPPLLIMGNEH 184


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -2

Query: 98  TGQQETAGDKHIEYDLAIAPVVEFRASRI 12
           TGQQE   D    +  AI  VVEF A RI
Sbjct: 229 TGQQELLQDFSKRFSPAIRGVVEF-AKRI 256


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 300 KLARMTALWIGNGC 341
           KL RMT  W+G  C
Sbjct: 1   KLWRMTGTWVGGFC 14


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +3

Query: 366 LVNEHLLKDNLALEFVLEVFATVKQERGVASLIAALKRGQL 488
           +++E  +      +FV+++F T K  + +  L+ A   G+L
Sbjct: 413 IMSEKRIMGEADCDFVVKLFKTFKDRKYLYMLMEACLGGEL 453


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,690
Number of Sequences: 438
Number of extensions: 3036
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)