Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_N20
(582 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF282168-1|AAG03039.1| 437|Homo sapiens DRC3 protein. 32 1.3
AF282167-1|AAG03038.1| 437|Homo sapiens DRC3 protein. 32 1.3
AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein. 31 3.9
AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein. 31 3.9
AL445068-2|CAI22520.1| 366|Homo sapiens protein ( Human DNA seq... 30 5.2
AL050350-5|CAI42513.1| 366|Homo sapiens protein ( Human DNA seq... 30 5.2
BC112034-1|AAI12035.1| 157|Homo sapiens hypothetical protein LO... 30 6.8
BC093711-1|AAH93711.1| 157|Homo sapiens hypothetical protein LO... 30 6.8
X79193-1|CAA55785.1| 346|Homo sapiens MO15/CDK-activating kinas... 29 9.1
X77743-1|CAA54793.1| 346|Homo sapiens CDK activating kinase pro... 29 9.1
X77303-1|CAA54508.1| 346|Homo sapiens Cdk-activating kinase pro... 29 9.1
L20320-1|AAA36657.1| 346|Homo sapiens protein serine/threonine ... 29 9.1
BC005298-1|AAH05298.1| 346|Homo sapiens cyclin-dependent kinase... 29 9.1
BC000834-1|AAH00834.1| 346|Homo sapiens cyclin-dependent kinase... 29 9.1
AY130859-1|AAM77799.1| 346|Homo sapiens cyclin-dependent kinase... 29 9.1
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 29 9.1
>AF282168-1|AAG03039.1| 437|Homo sapiens DRC3 protein.
Length = 437
Score = 32.3 bits (70), Expect = 1.3
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 293 RLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEAPGGLAPRPF 156
R R++ ++ P+PR S A PPRSAP P LAP P+
Sbjct: 390 RAARDRAAQSQGPAPRNRSSARAR---TPPRSAPGCRPRALAPGPW 432
>AF282167-1|AAG03038.1| 437|Homo sapiens DRC3 protein.
Length = 437
Score = 32.3 bits (70), Expect = 1.3
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 293 RLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEAPGGLAPRPF 156
R R++ ++ P+PR S A PPRSAP P LAP P+
Sbjct: 390 RAARDRAAQSQGPAPRNRSSARAR---TPPRSAPGCRPRALAPGPW 432
>AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein.
Length = 1089
Score = 30.7 bits (66), Expect = 3.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -2
Query: 548 SMELERSGRKENSSRTSRRRLQATLGYPVEHSLLTRGNDY*NGSAAGFRNRNR 390
S RSGR+ +S R+SRR ++ + S +R Y + S + + +R+R
Sbjct: 437 SRSRSRSGRRHSSHRSSRRSYSSSSDASSDQSCYSRQRSYSDDSYSDYSDRSR 489
>AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein.
Length = 1450
Score = 30.7 bits (66), Expect = 3.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -2
Query: 548 SMELERSGRKENSSRTSRRRLQATLGYPVEHSLLTRGNDY*NGSAAGFRNRNR 390
S RSGR+ +S R+SRR ++ + S +R Y + S + + +R+R
Sbjct: 798 SRSRSRSGRRHSSHRSSRRSYSSSSDASSDQSCYSRQRSYSDDSYSDYSDRSR 850
>AL445068-2|CAI22520.1| 366|Homo sapiens protein ( Human DNA
sequence from clone RP1-71D21 on chromosome 6. ).
Length = 366
Score = 30.3 bits (65), Expect = 5.2
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -2
Query: 251 PRQSSRASLEYLLLPPRSAPTEAPGGLAPRPFCALRRARPTRYG 120
PR +SR + Y+ R AP G P P C R RP R G
Sbjct: 65 PRGASRRQVTYVR-SGRRAPPGGGGSGTPEPGCCAPRGRPRRKG 107
>AL050350-5|CAI42513.1| 366|Homo sapiens protein ( Human DNA
sequence from clone RP1-261K5 on chromosome 6q21-22.1
Contains the 3' end of the SLC22A16 gene for solute
carrier family ).
Length = 366
Score = 30.3 bits (65), Expect = 5.2
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -2
Query: 251 PRQSSRASLEYLLLPPRSAPTEAPGGLAPRPFCALRRARPTRYG 120
PR +SR + Y+ R AP G P P C R RP R G
Sbjct: 65 PRGASRRQVTYVR-SGRRAPPGGGGSGTPEPGCCAPRGRPRRKG 107
>BC112034-1|AAI12035.1| 157|Homo sapiens hypothetical protein
LOC284009 protein.
Length = 157
Score = 29.9 bits (64), Expect = 6.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 271 CSRETLLHVSPPGPRWSICYYHQDLHR-RRLQAGSRPDP 158
C R ++H+ G RW + HR RR GSRP P
Sbjct: 40 CGRPAVVHIGGEGARWEKGARGRKEHRLRRSDLGSRPVP 78
>BC093711-1|AAH93711.1| 157|Homo sapiens hypothetical protein
LOC284009 protein.
Length = 157
Score = 29.9 bits (64), Expect = 6.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 271 CSRETLLHVSPPGPRWSICYYHQDLHR-RRLQAGSRPDP 158
C R ++H+ G RW + HR RR GSRP P
Sbjct: 40 CGRPAVVHIGGEGARWEKGARGRKEHRLRRSDLGSRPVP 78
>X79193-1|CAA55785.1| 346|Homo sapiens MO15/CDK-activating kinase
(CAK) protein.
Length = 346
Score = 29.5 bits (63), Expect = 9.1
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = -2
Query: 362 YLTYTIYKINTPHRHKISP*A*DRLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEA 183
Y+T+ + P H S D L Q LF NP R ++ +L+ R PT
Sbjct: 246 YVTFKSFP-GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT-- 302
Query: 182 PGGLAPRPFC 153
PG PRP C
Sbjct: 303 PGCQLPRPNC 312
>X77743-1|CAA54793.1| 346|Homo sapiens CDK activating kinase
protein.
Length = 346
Score = 29.5 bits (63), Expect = 9.1
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = -2
Query: 362 YLTYTIYKINTPHRHKISP*A*DRLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEA 183
Y+T+ + P H S D L Q LF NP R ++ +L+ R PT
Sbjct: 246 YVTFKSFP-GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT-- 302
Query: 182 PGGLAPRPFC 153
PG PRP C
Sbjct: 303 PGCQLPRPNC 312
>X77303-1|CAA54508.1| 346|Homo sapiens Cdk-activating kinase
protein.
Length = 346
Score = 29.5 bits (63), Expect = 9.1
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = -2
Query: 362 YLTYTIYKINTPHRHKISP*A*DRLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEA 183
Y+T+ + P H S D L Q LF NP R ++ +L+ R PT
Sbjct: 246 YVTFKSFP-GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT-- 302
Query: 182 PGGLAPRPFC 153
PG PRP C
Sbjct: 303 PGCQLPRPNC 312
>L20320-1|AAA36657.1| 346|Homo sapiens protein serine/threonine
kinase protein.
Length = 346
Score = 29.5 bits (63), Expect = 9.1
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = -2
Query: 362 YLTYTIYKINTPHRHKISP*A*DRLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEA 183
Y+T+ + P H S D L Q LF NP R ++ +L+ R PT
Sbjct: 246 YVTFKSFP-GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT-- 302
Query: 182 PGGLAPRPFC 153
PG PRP C
Sbjct: 303 PGCQLPRPNC 312
>BC005298-1|AAH05298.1| 346|Homo sapiens cyclin-dependent kinase 7
(MO15 homolog, Xenopus laevis, cdk-activating kinase)
protein.
Length = 346
Score = 29.5 bits (63), Expect = 9.1
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = -2
Query: 362 YLTYTIYKINTPHRHKISP*A*DRLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEA 183
Y+T+ + P H S D L Q LF NP R ++ +L+ R PT
Sbjct: 246 YVTFKSFP-GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT-- 302
Query: 182 PGGLAPRPFC 153
PG PRP C
Sbjct: 303 PGCQLPRPNC 312
>BC000834-1|AAH00834.1| 346|Homo sapiens cyclin-dependent kinase 7
(MO15 homolog, Xenopus laevis, cdk-activating kinase)
protein.
Length = 346
Score = 29.5 bits (63), Expect = 9.1
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = -2
Query: 362 YLTYTIYKINTPHRHKISP*A*DRLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEA 183
Y+T+ + P H S D L Q LF NP R ++ +L+ R PT
Sbjct: 246 YVTFKSFP-GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT-- 302
Query: 182 PGGLAPRPFC 153
PG PRP C
Sbjct: 303 PGCQLPRPNC 312
>AY130859-1|AAM77799.1| 346|Homo sapiens cyclin-dependent kinase 7
protein.
Length = 346
Score = 29.5 bits (63), Expect = 9.1
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = -2
Query: 362 YLTYTIYKINTPHRHKISP*A*DRLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEA 183
Y+T+ + P H S D L Q LF NP R ++ +L+ R PT
Sbjct: 246 YVTFKSFP-GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT-- 302
Query: 182 PGGLAPRPFC 153
PG PRP C
Sbjct: 303 PGCQLPRPNC 312
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 29.5 bits (63), Expect = 9.1
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -2
Query: 266 TRNPSP----RQSSRASLEYLLLPPRSAPTEAPGGLAPRPFCALRRARPTR 126
TR+PS R SRASL PPR++PT P +PR RA PTR
Sbjct: 168 TRSPSTASLTRTPSRASLTRW--PPRASPTRTPPRESPR---MSHRASPTR 213
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,979,790
Number of Sequences: 237096
Number of extensions: 2071797
Number of successful extensions: 5724
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5722
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -