Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_N20
         (582 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   0.95 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   1.7  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   2.2  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   5.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.1  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   6.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 489  SSGHFGLPRRTLAFNTRERLLKRFRCR 409
            +  ++G+P  TL +  +ER L R R R
Sbjct: 1065 AGSYYGVPHSTLEYKVKERHLMRPRKR 1091


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -1

Query: 201 ICTDGGSRRARAQTLLRSPPRTSYSLRLNDTRVSASH 91
           +C    SR       L SPPR   + R+N T++   H
Sbjct: 120 LCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHH 156



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 462 DGVTQSGLKTPPRGPG 509
           DG     L +PPR PG
Sbjct: 128 DGPPSVSLSSPPREPG 143


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 507 PDLSAASSGHFGLPRRTLA 451
           PDL+  S G  GLP   LA
Sbjct: 336 PDLAGTSQGSAGLPSAILA 354


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 576 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 493
           SE   P+   HG R  RQ+ +   D  +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 425 FNNRSLVLKASVRRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIEG 562
           +NN S +   S   G P+  +  +  +G+ FL  L+  V  +P+ G
Sbjct: 8   YNNVSPLQCTSPFLGGPQLTDVCSASNGELFLALLNFFVATSPVIG 53


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -3

Query: 553 RIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSNTRF*HEGTI 431
           +IPW+ N +A  K   G  G      W+    T+   EG I
Sbjct: 334 QIPWDKNVEALAKWANGQTGFP----WIDAIMTQLREEGWI 370


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 299 KLKERSYVDVACLFYISYMLDK 364
           KLKE  Y+ + C   +   LDK
Sbjct: 143 KLKEMFYLIIECSLNLETYLDK 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,349
Number of Sequences: 438
Number of extensions: 4466
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)