Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_N19
(579 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 256 2e-69
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 255 3e-69
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 216 2e-57
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 31 0.12
SPAC1805.06c |hem2||porphobilinogen synthase Hem2 |Schizosacchar... 30 0.21
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.65
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.5
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 1.5
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 27 2.0
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 27 2.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.6
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 3.5
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.6
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 26 4.6
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 25 6.1
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 25 6.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.1
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 25 8.0
>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 256 bits (627), Expect = 2e-69
Identities = 113/190 (59%), Positives = 148/190 (77%), Gaps = 1/190 (0%)
Frame = +3
Query: 12 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVL 191
I KRAE Y EYR ER++I LAR+AR GNY+VP E KL FV+RIRG+N + PK RK++
Sbjct: 51 IAKRAEAYEAEYRAAEREQIELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIM 110
Query: 192 QLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPI 371
QL RL QINNG+FV+ NKA ML++ EPY+ +G PN K+VREL+YKRGF K+N +R+P+
Sbjct: 111 QLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPL 170
Query: 372 TSNSLIEKRLSKQNIICVEDLIHEIFTVGEKFKYASNFLWPFKLNNPTGGWR-RKTIHYV 548
+ N++IE L K +I+ VEDLIHEI+TVG FK A+NFLWPFKL++P GGWR RK H++
Sbjct: 171 SDNAIIEAALGKYSILSVEDLIHEIYTVGPNFKQAANFLWPFKLSSPLGGWRERKFKHFI 230
Query: 549 DGGDFGNRED 578
+GGD G R++
Sbjct: 231 EGGDAGKRDE 240
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 255 bits (625), Expect = 3e-69
Identities = 113/190 (59%), Positives = 148/190 (77%), Gaps = 1/190 (0%)
Frame = +3
Query: 12 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVL 191
I KRAE Y EYR ER++I L R+AR GNYYVP E KL FVIRIRG+N + PK RK++
Sbjct: 52 IAKRAESYDAEYRKAEREQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIM 111
Query: 192 QLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPI 371
QL RL QINNGVFV+ NKAT ML++ EPY+ +G PNLK+VREL+YKRGF K+N +R+ +
Sbjct: 112 QLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIAL 171
Query: 372 TSNSLIEKRLSKQNIICVEDLIHEIFTVGEKFKYASNFLWPFKLNNPTGGWR-RKTIHYV 548
+ N++IE L K +I+ +EDLIHEI+TVG FK A+NF+WPF+L++P GGWR RK H++
Sbjct: 172 SDNAIIEAALGKYSILSIEDLIHEIYTVGPNFKQAANFIWPFQLSSPLGGWRDRKFKHFI 231
Query: 549 DGGDFGNRED 578
+GGD G R++
Sbjct: 232 EGGDAGKRDE 241
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 216 bits (527), Expect = 2e-57
Identities = 100/188 (53%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Frame = +3
Query: 6 REIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRK 185
+E FKRAE ++ YR +ER+ IRL R A+N+G+ +VP E KL FVIRI GV + PK+RK
Sbjct: 48 KETFKRAETFINNYRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRK 107
Query: 186 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRV 365
VL+L RL +INN VFVR NKA MLRI EPY+ +G PNL SVREL+YKRGF K+NG+R+
Sbjct: 108 VLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKINGQRI 167
Query: 366 PITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKFKYASNFLWPFKLNNPTGGWRRKTI-H 542
++ N+LIE+ L K ++I +ED+IHEI+ VG FK + FLWPF L K + H
Sbjct: 168 ALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLTPVKHSLMEKKVKH 227
Query: 543 YVDGGDFG 566
+ +G G
Sbjct: 228 FNEGRKAG 235
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 31.1 bits (67), Expect = 0.12
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +1
Query: 382 HSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 486
HSS + L+N+ SSAL+++ + S +SSS+Q +S
Sbjct: 90 HSSSQKLSNKVSSALKLTIPKRWRSSKSSSSQCSS 124
>SPAC1805.06c |hem2||porphobilinogen synthase Hem2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 30.3 bits (65), Expect = 0.21
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 300 NLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLS--KQNIICVEDLIHEIFTVGEKFKY 473
N KSV + G L G ++ I+ + ++ R+ KQ ++ +E L H++ + K+
Sbjct: 143 NAKSVERIAEVSGNYALAGAQI-ISPSDCMDGRVKAIKQKLVELE-LSHKVCVISYSAKF 200
Query: 474 ASNFLWPFK 500
AS F PF+
Sbjct: 201 ASGFFGPFR 209
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.7 bits (61), Expect = 0.65
Identities = 30/105 (28%), Positives = 50/105 (47%)
Frame = +1
Query: 187 YCSCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVS 366
Y + +G +++T + S VS+ + S SP T T S S +++ S + + S S
Sbjct: 116 YLTGNGVLQTTVSSSSVSSTTSSSS--SSSPSSSSTTTTTSPSSSSSSSSSSSS-SSSSS 172
Query: 367 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN 501
S + SS ++ +SS+ SS S SSS +TS S+
Sbjct: 173 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSS 217
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 313 SESWCTNAVSPN*TGSVSRSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 486
S S +++ S + S + +HSS ++ +SS+ R SS ++ SSST +++
Sbjct: 195 SSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFIST 252
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 1.5
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = +1
Query: 208 VRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TG-------SVS 366
V STTA S ST P T S + +TP V+ + T+A S T SVS
Sbjct: 460 VNSTTATSASST-PL-TSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVS 517
Query: 367 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN*TT 510
+ P++++ L + S+ +SS + +SST +TS + T+
Sbjct: 518 STAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTATS 565
Score = 25.8 bits (54), Expect = 4.6
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = +1
Query: 208 VRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TG-------SVS 366
V STTA S ST P T S + +TP V+ + T+A S T SVS
Sbjct: 346 VNSTTATSASST-PL-TSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVS 403
Query: 367 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN*TT 510
+ P++++ L + S+ +SS + +SST ++S + T+
Sbjct: 404 STAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATS 451
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 87 ARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRL 206
+ N+G YY G +AFV I GV + SP++ LQL ++
Sbjct: 1133 SENKGMYY--GLLGIAFVA-IAGVTEFSPELNAKLQLVKM 1169
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 297 PNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 419
P LK+ REL+ K+ + V SN ++EK L +II
Sbjct: 423 PKLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDII 463
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 2.0
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -3
Query: 538 IVFLRQPPVGLFSLNGHRKLLAYLNFSPTVNISWMRSSTQMMF--CLLSLFSMSELEVI 368
IV++ Q + LFSL G L ++ + T+ SW ++ CLLS+ + ++ I
Sbjct: 68 IVYILQ--IFLFSLFGSCMLFRFIKYPSTIKDSWNHHLEKLFIATCLLSISTFIDMLAI 124
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 2.6
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +1
Query: 208 VRSTTACSFVSTRPQ*TC--FVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVSRSPPT 381
V ST++ +F S P T ++S S ++ ++ S S T++ + S S P T
Sbjct: 189 VSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSS-----SLSTSSIPST 243
Query: 382 HSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN 501
SS ++ TSS+L SS S SSS+ + S S+
Sbjct: 244 SSS----SSSTSSSLSSSSSSSTASSSSSSSSIISSSSSS 279
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +3
Query: 21 RAEQYVKEYRIKERDEIRLARQARNRGNYYVPGE 122
+A Q ++ + +RL N+ N+++PGE
Sbjct: 309 KATQMTVDFLVDWAKSVRLCANRFNKSNFFIPGE 342
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 4.6
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +1
Query: 193 SCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVSRS 372
S S + S+++ S+ S S L ++ T S S+ T+ VS + S S S
Sbjct: 36 SSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSS 95
Query: 373 PP-THSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 486
T SS L + +S++ SS + LS SSS +S
Sbjct: 96 ASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASS 134
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 4.6
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 500 FEWPQEVTCVLELLTDSKYLMDEILNADDV-LFAKSLLD 387
F W CV S+Y+M +N D FA S LD
Sbjct: 125 FNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLD 163
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.4 bits (53), Expect = 6.1
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 373 PPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN 501
PP HS+ D++N ++ AL S+M + ++ST+ T ++N
Sbjct: 110 PPFHSANSDVSNNSNGALS-SNMLKTHAHHTNSTKSTIFRNAN 151
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 6.1
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = -3
Query: 472 YLNFSPTVNISWMRSSTQMMFCLLSLFSMSELEVIGT 362
Y++ PT+++ ++ S+ +FCL L S++ LE++ T
Sbjct: 253 YVHEYPTLDLIYIFSALMSVFCL--LLSVASLELLHT 287
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 6.1
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVSRSPPTHSSRRDLANRTSSALRIS 435
T S S ++ ++P S S ++ S T S S S THSS A +SSA+ S
Sbjct: 676 TLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTS 735
Query: 436 -SMRYLLSVRSSSTQVTSCGHSN 501
+ L++ SS+T ++S S+
Sbjct: 736 VNSSTLITASSSNTLLSSITSSS 758
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 25.0 bits (52), Expect = 8.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 506 VQFEWPQEVTCVLELLTDSKYLMDEILNADDVLFAKSLLD 387
V+F PQ + +L +KYL D+++ D+ A L+D
Sbjct: 136 VKFTEPQIKCYMKQLFAGTKYLHDQLILHRDLKAANLLID 175
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,319,191
Number of Sequences: 5004
Number of extensions: 46436
Number of successful extensions: 170
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 248115846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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