Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_N18
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical ... 116 1e-26
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 36 0.017
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 36 0.017
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 35 0.030
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 35 0.030
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 34 0.070
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 34 0.070
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 33 0.093
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 32 0.28
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 32 0.28
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 31 0.37
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 31 0.65
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr... 30 0.86
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr... 30 0.86
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 30 0.86
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 30 0.86
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 30 0.86
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 30 1.1
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 29 1.5
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical ... 29 1.5
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z29117-13|CAA82377.2| 435|Caenorhabditis elegans Hypothetical p... 29 2.6
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 29 2.6
U00036-3|AAT92065.1| 529|Caenorhabditis elegans Dumpy : shorter... 29 2.6
U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter... 29 2.6
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 29 2.6
AL132841-2|CAB60332.1| 469|Caenorhabditis elegans Hypothetical ... 29 2.6
U00033-9|AAC48293.1| 323|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 27 6.1
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 27 6.1
Z73425-4|CAA97786.1| 667|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 27 8.0
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 27 8.0
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 27 8.0
AF098985-6|AAY55852.1| 182|Caenorhabditis elegans Hypothetical ... 27 8.0
AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode asta... 27 8.0
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 27 8.0
>AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical
protein M04F3.4 protein.
Length = 172
Score = 116 bits (278), Expect = 1e-26
Identities = 53/84 (63%), Positives = 61/84 (72%)
Frame = +3
Query: 153 MAFHSPMPSRDFLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQ 332
MAF P L IF VDKDRSG IS+DELQ ALSNGTWNPFNPET RLMIGMFD
Sbjct: 1 MAFQQPN-----LQQIFSSVDKDRSGQISSDELQTALSNGTWNPFNPETCRLMIGMFDSN 55
Query: 333 NRGVISFEDFGALWKYVTEWQSCF 404
G I+F++F ALW+Y+ +W +CF
Sbjct: 56 GDGAINFQEFQALWRYINDWTNCF 79
Score = 43.6 bits (98), Expect = 9e-05
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1
Query: 418 DSDNSGNIDKNELKTALTDFGYRLS 492
D+D SGNIDK+EL ALT FGYRLS
Sbjct: 83 DTDGSGNIDKSELTNALTQFGYRLS 107
Score = 34.7 bits (76), Expect = 0.040
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 201 FRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDF 362
FR D D SG I EL AL+ + +P+ +++ FD+ + I+F+DF
Sbjct: 79 FRGFDTDGSGNIDKSELTNALTQFGYR-LSPQFYNILMHKFDRSHSNRINFDDF 131
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 35.9 bits (79), Expect = 0.017
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 177 SRDFLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFE 356
S + + + FR DKD +G+ISA EL+ ++N E V MI D G +++E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 357 DF 362
+F
Sbjct: 141 EF 142
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 35.9 bits (79), Expect = 0.017
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 177 SRDFLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFE 356
S + + + FR DKD +G+ISA EL+ ++N E V MI D G +++E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 357 DF 362
+F
Sbjct: 141 EF 142
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 35.1 bits (77), Expect = 0.030
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +3
Query: 201 FRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFGAL 371
F DK+ GYI A ++ Q L F ++ +I FD G I FE+F A+
Sbjct: 24 FNMFDKEGKGYIRATQVGQILRT-MGQAFEERDLKQLIKEFDADGSGEIEFEEFAAM 79
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 189 LWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDF 362
L + FR DK+ +GYI+ +L+ L + + E + MI D G + F++F
Sbjct: 97 LREAFRLYDKEGNGYINVSDLRDIL-RALDDNVSEEELDEMIAEIDADGSGTVDFDEF 153
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 35.1 bits (77), Expect = 0.030
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +3
Query: 201 FRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFGAL 371
F DK+ GYI A ++ Q L F ++ +I FD G I FE+F A+
Sbjct: 24 FNMFDKEGKGYIRATQVGQILRT-MGQAFEERDLKQLIKEFDADGSGEIEFEEFAAM 79
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 189 LWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDF 362
L + FR DK+ +GYI+ +L+ L + + E + MI D G + F++F
Sbjct: 97 LREAFRLYDKEGNGYINVSDLRDIL-RALDDNVSEEELDEMIAEIDADGSGTVDFDEF 153
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 33.9 bits (74), Expect = 0.070
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +3
Query: 183 DFLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDF 362
+ + + FR D+D +G+I+ADE + +++ + F+ + V +I D G I +E+F
Sbjct: 107 EMIREAFRVFDRDGNGFITADEFRYFMTH-MGDQFSDQEVDEIIAEIDIDGDGQIDYEEF 165
Query: 363 GA 368
+
Sbjct: 166 AS 167
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 33.9 bits (74), Expect = 0.070
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +3
Query: 183 DFLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDF 362
+ + + FR D+D +G+I+ADE + +++ + F+ + V +I D G I +E+F
Sbjct: 107 EMIREAFRVFDRDGNGFITADEFRYFMTH-MGDQFSDQEVDEIIAEIDIDGDGQIDYEEF 165
Query: 363 GA 368
+
Sbjct: 166 AS 167
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 33.5 bits (73), Expect = 0.093
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 198 IFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFED 359
+ + D D +G I DE L +P +R + +FDK GVIS +D
Sbjct: 48 MIEQADLDGNGCIDIDEFLNVLRRQICDPKEERELRDVFNVFDKNGDGVISIDD 101
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 195 DIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDF 362
++FR DK+ G I+ EL+ AL N + + MI D G I ++F
Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSK-IETMIEQADLDGNGCIDIDEF 65
Score = 27.5 bits (58), Expect = 6.1
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +3
Query: 135 FLTK*KMAFHSPMPSRDFLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMI 314
FL + P R+ L D+F DK+ G IS D+L + + MI
Sbjct: 65 FLNVLRRQICDPKEERE-LRDVFNVFDKNGDGVISIDDLIFVMCQ-LGEKLTETEAKEMI 122
Query: 315 GMFDKQNRGVISFEDF 362
D + G+I F++F
Sbjct: 123 KQGDLDHDGMIDFQEF 138
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +3
Query: 198 IFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFGALWK 377
+F D DRSG I+ DEL+ A+ N E ++ I D++ I F++F + +
Sbjct: 61 VFNMFDADRSGAIAIDELEAAIKNLGLEQTRDELDKI-IDEVDQRGNHQIDFDEFCVVMR 119
Query: 378 YVT 386
+T
Sbjct: 120 RLT 122
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 439 CSRSCRCPNGYGKQLCHSVTY 377
C R CRCP+GYG C +V Y
Sbjct: 328 CGR-CRCPSGYGGTYCETVEY 347
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 439 CSRSCRCPNGYGKQLCHSVTY 377
C R CRCP+GYG C +V Y
Sbjct: 328 CGR-CRCPSGYGGTYCETVEY 347
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 439 CSRSCRCPNGYGKQLCHSVTY 377
C R CRCP+GYG C +V Y
Sbjct: 328 CGR-CRCPSGYGGTYCETVEY 347
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 183 DFLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDF 362
D L IFR D + GYI +EL+ + +P E + M DK G I F++F
Sbjct: 21 DDLKGIFREFDLNGDGYIQREELRAVMQKMGQSPTEDE-LDAMFQAADKDCDGNIDFQEF 79
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 198 IFRRVDKDRSGYISADELQQALSN-GTWNPFNPETVRLMIGMFDKQNRGVISFEDF 362
+F+ +DKD G+IS ELQ ++N W E + I D G++ E+F
Sbjct: 284 VFQDLDKDGDGFISVAELQAVMTNLQAW--LTEEEIDDGIRSADISGDGLVDLEEF 337
>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 30.3 bits (65), Expect = 0.86
Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +3
Query: 276 WNPFNPETVRLMIGMFDKQNRGVISFEDFGALWKY---VTEWQSCF 404
W T+ + +F+ Q + +++ DFGA+W+ +W +C+
Sbjct: 1056 WTETCIHTISAISKIFNSQRKSLLALNDFGAVWEAFLGYLDWAACY 1101
>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 30.3 bits (65), Expect = 0.86
Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +3
Query: 276 WNPFNPETVRLMIGMFDKQNRGVISFEDFGALWKY---VTEWQSCF 404
W T+ + +F+ Q + +++ DFGA+W+ +W +C+
Sbjct: 1056 WTETCIHTISAISKIFNSQRKSLLALNDFGAVWEAFLGYLDWAACY 1101
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 30.3 bits (65), Expect = 0.86
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 189 LWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFGA 368
L + FR DK+ +GYIS L +AL + + + + D+ G I FE+F
Sbjct: 96 LREAFRLFDKEGNGYISRPTL-KALLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEFWE 154
Query: 369 L 371
L
Sbjct: 155 L 155
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 30.3 bits (65), Expect = 0.86
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 189 LWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFGA 368
L + FR DK+ +GYIS L +AL + + + + D+ G I FE+F
Sbjct: 96 LREAFRLFDKEGNGYISRPTL-KALLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEFWE 154
Query: 369 L 371
L
Sbjct: 155 L 155
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 30.3 bits (65), Expect = 0.86
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 189 LWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFGA 368
L + FR DK+ +GYIS L +AL + + + + D+ G I FE+F
Sbjct: 96 LREAFRLFDKEGNGYISRPTL-KALLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEFWE 154
Query: 369 L 371
L
Sbjct: 155 L 155
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 177 SRDFLWDIFRRVDKDRSGYISADELQQALSN 269
S + + + FR DKD +G+ISA EL+ ++N
Sbjct: 31 SEEEIREAFRVFDKDGNGFISAAELRHVMTN 61
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 418 DSDNSGNIDKNELKTALTDFGYRLSDDVVSTM 513
D DNSG +++ L+ LT G R S++ V +
Sbjct: 111 DEDNSGKLNEEHLRELLTTMGERYSEEQVDEL 142
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 418 DSDNSGNIDKNELKTALTDFGYRLSDDVVSTM 513
D DNSG +++ L+ LT G R S++ V +
Sbjct: 111 DEDNSGKLNEEHLRELLTTMGERYSEEQVDEL 142
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +3
Query: 168 PMPSRDFLWDIFRR-VDKDRSG---YISADELQQALSNGTWNPFNPETVRLMIGMFDKQN 335
P + D L IF R K+ G D ++ L T +N ETVRL+ D
Sbjct: 50 PRANPDHLRPIFDRFATKEIKGKKLMTPEDFIRGYLGLYTEENYNKETVRLLASAADTTK 109
Query: 336 RGVISFEDFGA 368
G ISFE+F A
Sbjct: 110 DGDISFEEFCA 120
>AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical
protein F41B5.9 protein.
Length = 502
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 243 DELQQALSNGTWNPFNPETVRL 308
D + L NG+W P+NPE L
Sbjct: 166 DRATEILKNGSWQPYNPEMTSL 187
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +3
Query: 195 DIFRRVDKDRSGYISADELQQAL--SNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFGA 368
++ + VD D +G I +E + S N E +R +FD+ G+I+ +F
Sbjct: 91 NVIKEVDADGNGEIDFEEFCACMKKSQNIVKSTNEELIRECFEIFDQDRNGIITENEF-- 148
Query: 369 LWKYVTEWQSCFPYPFGQRQLRE 437
KY+ + F ++ RE
Sbjct: 149 --KYIAKEFGDFDDELAEKVFRE 169
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 201 FRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDF 362
F+ DKD +GYI+A E + ++ F+ E V +I DK I ++F
Sbjct: 101 FKVFDKDGNGYITAQEFKHFMTT-MGERFSEEEVDEIIREVDKDGDEQIDLDEF 153
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 174 PSRDFLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISF 353
P+ + L ++ D D +G I E + + + E +RL +FDK G I+
Sbjct: 56 PTEEELLNMVNEYDVDGNGKIDFGEFCKMMKEMN-KETDQELIRLAFKVFDKDGNGYITA 114
Query: 354 EDF 362
++F
Sbjct: 115 QEF 117
>Z29117-13|CAA82377.2| 435|Caenorhabditis elegans Hypothetical
protein C48B4.2 protein.
Length = 435
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 198 IFRRVDKDRSGYISADELQQALSNGTWN-PFNPETVRLMIGMFDKQNRGVISFEDF 362
IFR D D G I +E+Q+ + + T++ F+ ++ M + + + F DF
Sbjct: 22 IFRAFDTDHDGLIQCEEMQKTIRDSTYSFGFDHYELQKMSLYLEMREGKPVDFADF 77
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 427 CRCPNGYGKQLCHS 386
C CPNGYG Q C +
Sbjct: 207 CSCPNGYGGQTCET 220
>U00036-3|AAT92065.1| 529|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform b protein.
Length = 529
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 442 RCSRSCRCPNGYGKQLCHSV 383
RC R CRCP+G+ Q C V
Sbjct: 345 RCDR-CRCPDGFTGQYCEQV 363
>U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform a protein.
Length = 592
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 442 RCSRSCRCPNGYGKQLCHSV 383
RC R CRCP+G+ Q C V
Sbjct: 345 RCDR-CRCPDGFTGQYCEQV 363
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 427 CRCPNGYGKQLCHS 386
C CPNGYG Q C +
Sbjct: 207 CSCPNGYGGQTCET 220
>AL132841-2|CAB60332.1| 469|Caenorhabditis elegans Hypothetical
protein Y15E3A.4 protein.
Length = 469
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 44 VVYSNKTPRIPLKFYNYSVLAVAWLLHWFF 133
+ YSNK I + LA AW HWF+
Sbjct: 63 LAYSNKQKSIIMWAAAVGTLAAAWPFHWFY 92
>U00033-9|AAC48293.1| 323|Caenorhabditis elegans Hypothetical
protein F37C12.1 protein.
Length = 323
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 367 LCGSTSQSGRVASRIRSDSDNSGNIDKNE 453
L G TS+ GR+ RI+ D DNS D+++
Sbjct: 201 LMGITSE-GRIERRIKDDEDNSDGADEDD 228
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 174 PSRDFLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISF 353
P+ + ++ VD D +G I E + + E +R +FDK GVI+
Sbjct: 114 PTEQEILEMINEVDIDGNGQIEFPEFCVMMKR-MMKETDSEMIREAFRVFDKDGNGVITA 172
Query: 354 EDF 362
++F
Sbjct: 173 QEF 175
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 174 PSRDFLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISF 353
P+ + ++ VD D +G I E + + E +R +FDK GVI+
Sbjct: 57 PTEQEILEMINEVDIDGNGQIEFPEFCVMMKR-MMKETDSEMIREAFRVFDKDGNGVITA 115
Query: 354 EDF 362
++F
Sbjct: 116 QEF 118
>Z73425-4|CAA97786.1| 667|Caenorhabditis elegans Hypothetical
protein F12F6.8 protein.
Length = 667
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +1
Query: 91 LFSVSSCLAFTLVLFF*LSKKWLSILQCQAGTSCGIFLEESIKTVVATFRQMNCNKPCQT 270
+ ++SC TLV+ S +L + + G I +I ++ + +C+ C+T
Sbjct: 331 IHQLNSCEVSTLVISLVNSVMFLPKMDTEHGREINIMAWNTIDSLASYVYSFDCDNICKT 390
Query: 271 EHGTLSIPKLYD 306
L+ +YD
Sbjct: 391 AMKFLTTTGVYD 402
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2
Query: 430 SCRCPNGYGKQLC 392
+C+CP G+G QLC
Sbjct: 344 NCKCPPGFGGQLC 356
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 186 FLWDIFRRVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFG 365
F+ +F + D+D+ G +S ELQ S P P + I + RG +++ +
Sbjct: 312 FVSALFEKYDEDKDGCLSPSELQNLFS---VCPV-PVITKDNILALETNQRGWLTYNGYM 367
Query: 366 ALWKYVT 386
A W T
Sbjct: 368 AYWNMTT 374
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2
Query: 430 SCRCPNGYGKQLC 392
+C+CP G+G QLC
Sbjct: 344 NCKCPPGFGGQLC 356
>AF098985-6|AAY55852.1| 182|Caenorhabditis elegans Hypothetical
protein C08G5.7 protein.
Length = 182
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 448 SYRCSRSCRCPNGYGKQLC 392
+Y+ S CRCP GY Q C
Sbjct: 75 AYKASFMCRCPFGYFGQSC 93
>AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode astacin
protease protein27 protein.
Length = 428
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 439 CSRSCRCPNGYGKQLCHSVTYFHKAPKSSND 347
CS+ C CP+G+G C ++ K ++D
Sbjct: 276 CSQ-CVCPDGFGGNFCETIEAHSVGQKDNSD 305
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = -1
Query: 512 IVLTTSSDSLYPKSVRAVLSSFLSMFPELSLSERIREATLPLCDVLPQSAEI 357
++L S+ + P++V ++ S P + ER+ ATLP+ ++P S E+
Sbjct: 128 VILERSTVFVTPETVGSIESGEDRKHP--TFLERLGSATLPIATIIPGSEEL 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,556,556
Number of Sequences: 27780
Number of extensions: 274856
Number of successful extensions: 986
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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