Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_N18
(518 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 1.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 1.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 1.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 3.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 3.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 3.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 3.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 3.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 4.3
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 7.6
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 7.6
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 7.6
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 405 GSNSATL*RTSTKRRNLQMILHPCSAYRTY 316
GS A + ++ ++HPCS++R Y
Sbjct: 61 GSKKALMKERIRQKAAGHWVIHPCSSFRFY 90
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 405 GSNSATL*RTSTKRRNLQMILHPCSAYRTY 316
GS A + ++ ++HPCS++R Y
Sbjct: 61 GSKKALMKERIRQKAAGHWVIHPCSSFRFY 90
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 405 GSNSATL*RTSTKRRNLQMILHPCSAYRTY 316
GS A + ++ ++HPCS++R Y
Sbjct: 61 GSKKALMKERIRQKAAGHWVIHPCSSFRFY 90
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 415 NGYGKQLCHSVTYFHKAP 362
N Y KQLC+++ Y + P
Sbjct: 97 NNY-KQLCYNINYIEQIP 113
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 415 NGYGKQLCHSVTYFHKAP 362
N Y KQLC+++ Y + P
Sbjct: 97 NNY-KQLCYNINYIEQIP 113
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 415 NGYGKQLCHSVTYFHKAP 362
N Y KQLC+++ Y + P
Sbjct: 97 NNY-KQLCYNINYIEQIP 113
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 415 NGYGKQLCHSVTYFHKAP 362
N Y KQLC+++ Y + P
Sbjct: 97 NNY-KQLCYNINYIEQIP 113
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 415 NGYGKQLCHSVTYFHKAP 362
N Y KQLC+++ Y + P
Sbjct: 97 NNY-KQLCYNINYIEQIP 113
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 4.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 212 DSSKNIPQEVPAWH 171
D +KN P +V WH
Sbjct: 65 DRTKNYPLDVDQWH 78
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 7.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 285 FNPETVRLMIGMFDKQNRGVISFE 356
+NPETV M D+ ISFE
Sbjct: 419 YNPETVSTDYDMSDRLYFEEISFE 442
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 212 DSSKNIPQEVPAWH 171
D +KN P +V WH
Sbjct: 64 DYTKNYPFDVDQWH 77
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 257 SLVKRNMEPFQSRNCTTYDRYVR 325
S + N E NCT Y +Y+R
Sbjct: 154 STYQSNGEEVCLENCTGYQQYLR 176
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,441
Number of Sequences: 438
Number of extensions: 3484
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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