Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_N15
         (491 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   1.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   7.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.1  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   9.4  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 39  FRQVNTKIMSKKCESFKRHTSCYSQKT 119
           F +VN +I++       R+T C + KT
Sbjct: 390 FNEVNFRILNAPVNQLIRYTRCENPKT 416


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 94  IQVAIVRRPKSLLIKKLPLF 153
           + VA++ RP + L+K  P++
Sbjct: 142 LSVAVIHRPDTKLMKLPPMY 161


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 94  IQVAIVRRPKSLLIKKLPLF 153
           + VA++ RP + L+K  P++
Sbjct: 142 LSVAVIHRPDTKLMKLPPMY 161


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 79  KVSKDIQVAIVRRPKSLLIKKLPLFM*TENVSNK 180
           K +KD+ + I  RPKS  ++   +   TE   +K
Sbjct: 463 KETKDMNLEISTRPKSNTVENACVLKNTEIFKDK 496


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 3/19 (15%)
 Frame = -3

Query: 441 KNLNTA---VKENFVNKIC 394
           KN N     VK+NF NK C
Sbjct: 93  KNCNAGSLTVKKNFANKYC 111


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +3

Query: 48  VNTKIMSKKCESFKRHTSCYSQ 113
           +++  +  +  SF+R +SC+S+
Sbjct: 212 ISSNSLGSRSRSFQRTSSCHSR 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,617
Number of Sequences: 438
Number of extensions: 2132
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)