Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_N13
(361 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 210 2e-55
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 210 3e-55
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 209 4e-55
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 209 4e-55
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 209 4e-55
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 208 7e-55
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 129 5e-31
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 129 5e-31
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 78 2e-15
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 75 1e-14
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 75 2e-14
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 75 2e-14
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 73 5e-14
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 73 5e-14
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 73 5e-14
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 73 5e-14
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 73 5e-14
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 73 5e-14
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 73 5e-14
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 73 5e-14
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 73 5e-14
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 73 5e-14
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 71 2e-13
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 65 2e-11
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 62 1e-10
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 28 1.7
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 28 1.7
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 27 3.0
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 27 3.0
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 27 3.9
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 27 3.9
Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 26 6.9
Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical pr... 26 9.1
U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily ass... 26 9.1
AL023828-27|CAI46622.1| 308|Caenorhabditis elegans Hypothetical... 26 9.1
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 210 bits (514), Expect = 2e-55
Identities = 95/98 (96%), Positives = 98/98 (100%)
Frame = +2
Query: 68 QMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAM 247
QMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAM
Sbjct: 329 QMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAM 388
Query: 248 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 361
FRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQ
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 426
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 210 bits (512), Expect = 3e-55
Identities = 95/98 (96%), Positives = 98/98 (100%)
Frame = +2
Query: 68 QMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAM 247
QMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRG+KMAATF+GNSTAIQELFKRISEQFTAM
Sbjct: 329 QMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAM 388
Query: 248 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 361
FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 209 bits (511), Expect = 4e-55
Identities = 95/98 (96%), Positives = 98/98 (100%)
Frame = +2
Query: 68 QMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAM 247
QM+N+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAM
Sbjct: 329 QMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAM 388
Query: 248 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 361
FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 209 bits (511), Expect = 4e-55
Identities = 96/98 (97%), Positives = 98/98 (100%)
Frame = +2
Query: 68 QMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAM 247
QMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAM
Sbjct: 329 QMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAM 388
Query: 248 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 361
FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 209 bits (511), Expect = 4e-55
Identities = 96/98 (97%), Positives = 98/98 (100%)
Frame = +2
Query: 68 QMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAM 247
QMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAM
Sbjct: 329 QMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAM 388
Query: 248 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 361
FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 208 bits (509), Expect = 7e-55
Identities = 94/98 (95%), Positives = 98/98 (100%)
Frame = +2
Query: 68 QMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAM 247
QML++QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAM
Sbjct: 329 QMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAM 388
Query: 248 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 361
FRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQ
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 426
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 129 bits (312), Expect = 5e-31
Identities = 58/98 (59%), Positives = 78/98 (79%)
Frame = +2
Query: 68 QMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAM 247
Q+++++N++ S +E +P + T VCDIP RGLK +ATFI NSTAIQE KRIS+QF +
Sbjct: 327 QIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGL 386
Query: 248 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 361
FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY+
Sbjct: 387 FRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 129 bits (312), Expect = 5e-31
Identities = 58/98 (59%), Positives = 78/98 (79%)
Frame = +2
Query: 68 QMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAM 247
Q+++++N++ S +E +P + T VCDIP RGLK +ATFI NSTAIQE KRIS+QF +
Sbjct: 327 QIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGL 386
Query: 248 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 361
FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY+
Sbjct: 387 FRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYE 421
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 77.8 bits (183), Expect = 2e-15
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K + FV+W P K + PP L+ A + N+TAIQE + R+ +
Sbjct: 335 IKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHK 394
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 75.4 bits (177), Expect = 1e-14
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Frame = +2
Query: 77 NIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISE 232
+++ K S FV+W P K + PP L+ A + N+TAI E + R+
Sbjct: 339 SVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDH 398
Query: 233 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 399 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 74.5 bits (175), Expect = 2e-14
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K S FV+W P K + PP + A + N+TAI E + R+ +
Sbjct: 333 IKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYK 392
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 74.5 bits (175), Expect = 2e-14
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K S FV+W P K + PP + A + N+TAI E + R+ +
Sbjct: 333 IKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYK 392
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 73.3 bits (172), Expect = 5e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K + FV+W P K + PP + A + N+TAI E + R+ +
Sbjct: 333 IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYK 392
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 73.3 bits (172), Expect = 5e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPRGLK--------MAATFIGNSTAIQELFKRISEQ 235
++ K + FVEW P K + PP + + I N+TAI E + R+ +
Sbjct: 341 VKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHK 400
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 401 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 73.3 bits (172), Expect = 5e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K + FV+W P K + PP + A + N+TAI E + R+ +
Sbjct: 333 IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYK 392
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 73.3 bits (172), Expect = 5e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K S FV+W P K + PP + A + N+TAI E + R+ +
Sbjct: 335 IKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHK 394
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 73.3 bits (172), Expect = 5e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K S FV+W P K + PP + A + N+TAI E + R+ +
Sbjct: 334 IKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHK 393
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 73.3 bits (172), Expect = 5e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K + FV+W P K + PP + A + N+TAI E + R+ +
Sbjct: 333 IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYK 392
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 73.3 bits (172), Expect = 5e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K + FV+W P K + PP + A + N+TAI E + R+ +
Sbjct: 333 IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYK 392
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 73.3 bits (172), Expect = 5e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K S FV+W P K + PP + A + N+TAI E + R+ +
Sbjct: 335 IKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHK 394
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 73.3 bits (172), Expect = 5e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPRGLK--------MAATFIGNSTAIQELFKRISEQ 235
++ K + FVEW P K + PP + + I N+TAI E + R+ +
Sbjct: 313 VKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHK 372
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 373 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 73.3 bits (172), Expect = 5e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 80 IQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQ 235
I+ K S FV+W P K + PP + A + N+TAI E + R+ +
Sbjct: 335 IKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHK 394
Query: 236 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 71.3 bits (167), Expect = 2e-13
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Frame = +2
Query: 77 NIQNKNSSYFVEWIPNNVKTAVCDIPPRGLK--------MAATFIGNSTAIQELFKRISE 232
+I+ + S FV+W P K + PP + A + N+TAI E ++R+
Sbjct: 329 SIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDY 388
Query: 233 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 64.9 bits (151), Expect = 2e-11
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Frame = +2
Query: 77 NIQNKNSSYFVEWIPNNVKTAV---CDIPPRG-----LKMAATFIGNSTAIQELFKRISE 232
+++ K FV+W P K + I G + A + N+TAI E + R+
Sbjct: 337 SVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDH 396
Query: 233 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
+F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y +
Sbjct: 397 KFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 62.1 bits (144), Expect = 1e-10
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = +2
Query: 185 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 355
+ ++TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 143 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 298
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 299 MEFTEAESNMNDLVSEY 349
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 143 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 298
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 299 MEFTEAESNMNDLVSEY 349
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 143 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 298
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 299 MEFTEAESNMNDLVSEY 349
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -2
Query: 255 RLNIAVNCSEMRLNSSWMAVELPMKVAAIFSPR 157
R N N ++++ S+ ++VE+P K+A +P+
Sbjct: 117 RTNTVDNLEKIKIESNGVSVEIPFKIARYTAPK 149
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 167 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DL 337
K++ + NST++ LF+ + ++ + ++AF+ + E +D + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 338 VSEYQ 352
+ EY+
Sbjct: 428 LDEYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 167 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DL 337
K++ + NST++ LF+ + ++ + ++AF+ + E +D + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 338 VSEYQ 352
+ EY+
Sbjct: 428 LDEYK 432
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 274 PVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDV-AHGGLHVVRDPFHE 104
P +++ S S ++FRD + +DG +T G L S+ ++ H L ++ FH+
Sbjct: 308 PSADNIISSESDDVFRDEGKMKIDGSSITFVGFVSLTSSKKEKRLHCRLRNMQLSFHD 365
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 274 PVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDV-AHGGLHVVRDPFHE 104
P +++ S S ++FRD + +DG +T G L S+ ++ H L ++ FH+
Sbjct: 308 PSADNIISSESDDVFRDEGKMKIDGSSITFVGFVSLTSSKKEKRLHCRLRNMQLSFHD 365
>Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical
protein R90.1 protein.
Length = 776
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 277 VPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSA 158
V Q++L S+ G F + E+++DGG D G L A
Sbjct: 494 VRTQQTLMSKWQGS-FDASCEEMMDGGDAEDRGHGRLNPA 532
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 26.2 bits (55), Expect = 6.9
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 170 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 349
MAA +G S+ I +L K + A F GEG+ E++ E D +S++
Sbjct: 2 MAARLLGTSSRIFKLNKHLHTSKVAFMPVVQFKLSDIGEGIAEVQVKEWYVKEGDTISQF 61
Query: 350 QQ 355
+
Sbjct: 62 DK 63
>Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical
protein C15C8.1 protein.
Length = 441
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 152 PPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEME 304
P GL + T NST +++ K + ++ +KAF G G+ +E
Sbjct: 7 PVPGLPLLTTLFCNSTTVKKKVKISCDFPDELYTKKAFYGGPIGAGLSAIE 57
>U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily
assigned gene nameprotein 292 protein.
Length = 722
Score = 25.8 bits (54), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 177 AAIFSPRGGMSHTAVFTLFGIHSTKYDEFLF*MLSICLVPNSC 49
AAI S G H V L + T+YD + C +PN C
Sbjct: 385 AAIKSVDGEEIHMLVVMLADDNKTRYDSLKKYLCVECPIPNQC 427
>AL023828-27|CAI46622.1| 308|Caenorhabditis elegans Hypothetical
protein Y17G7B.23 protein.
Length = 308
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 240 VNCSEMRLNSSWMAVELPMKVA-AIFSPRGGMSHTAVFTLFG 118
+ C+ L W A LP+K A +F + G ++ V T+ G
Sbjct: 14 IQCATSNLMEDWGATGLPLKPANLLFDDKCGTPNSLVSTVSG 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,207,571
Number of Sequences: 27780
Number of extensions: 141760
Number of successful extensions: 609
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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