BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_N12
(315 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L lon... 54 5e-08
AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, ... 54 5e-08
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 31 0.23
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro... 31 0.23
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro... 31 0.23
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 31 0.23
BT001652-1|AAN71407.1| 862|Drosophila melanogaster RE44147p pro... 27 3.8
AE014297-1654|AAF54928.2| 1012|Drosophila melanogaster CG32473-P... 27 3.8
BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p pro... 27 5.0
BT023839-1|AAZ86760.1| 1174|Drosophila melanogaster IP14658p pro... 26 8.8
BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p pro... 26 8.8
BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p pro... 26 8.8
AY118639-1|AAM50008.1| 1173|Drosophila melanogaster SD02424p pro... 26 8.8
AL132651-1|CAB65880.1| 1032|Drosophila melanogaster EG:BACR7A4.1... 26 8.8
AL109630-17|CAB65879.1| 1032|Drosophila melanogaster EG:BACR7A4.... 26 8.8
AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA... 26 8.8
AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB... 26 8.8
AE014296-3583|AAF51750.1| 171|Drosophila melanogaster CG14574-P... 26 8.8
AE014296-1891|AAF50106.3| 1174|Drosophila melanogaster CG7839-PA... 26 8.8
AE013599-3866|AAM68312.1| 469|Drosophila melanogaster CG30165-P... 26 8.8
>AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L long
isoform protein.
Length = 5322
Score = 53.6 bits (123), Expect = 5e-08
Identities = 24/42 (57%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 24 PRLWWDSEC-DISLLVGTYIHGYENYLAMRIDPQLCFIDKLG 146
P WW+ C D SLLVGTY HG E Y MR DP LCF+ +G
Sbjct: 2922 PSSWWNPICCDKSLLVGTYKHGCEMYRQMRADPNLCFVTHVG 2963
>AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA,
isoform A protein.
Length = 5322
Score = 53.6 bits (123), Expect = 5e-08
Identities = 24/42 (57%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 24 PRLWWDSEC-DISLLVGTYIHGYENYLAMRIDPQLCFIDKLG 146
P WW+ C D SLLVGTY HG E Y MR DP LCF+ +G
Sbjct: 2922 PSSWWNPICCDKSLLVGTYKHGCEMYRQMRADPNLCFVTHVG 2963
>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
chromodomain-helicase-DNA-bindingprotein protein.
Length = 1883
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 36 WDSECDISLLVGTYIHGYENYLAMRIDPQLCFIDKL 143
W E D LL G Y +G ++ M++DP L DK+
Sbjct: 1324 WGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKI 1359
>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p protein.
Length = 1645
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 36 WDSECDISLLVGTYIHGYENYLAMRIDPQLCFIDKL 143
W E D LL G Y +G ++ M++DP L DK+
Sbjct: 1324 WGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKI 1359
>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
protein.
Length = 1101
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 36 WDSECDISLLVGTYIHGYENYLAMRIDPQLCFIDKL 143
W E D LL G Y +G ++ M++DP L DK+
Sbjct: 792 WGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKI 827
>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
protein.
Length = 1883
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 36 WDSECDISLLVGTYIHGYENYLAMRIDPQLCFIDKL 143
W E D LL G Y +G ++ M++DP L DK+
Sbjct: 1324 WGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKI 1359
>BT001652-1|AAN71407.1| 862|Drosophila melanogaster RE44147p
protein.
Length = 862
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 45 ECDISLLVGTYIHGYEN 95
+CD+S LVG+YI Y N
Sbjct: 83 DCDLSSLVGSYISNYTN 99
>AE014297-1654|AAF54928.2| 1012|Drosophila melanogaster CG32473-PA,
isoform A protein.
Length = 1012
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 45 ECDISLLVGTYIHGYEN 95
+CD+S LVG+YI Y N
Sbjct: 233 DCDLSSLVGSYISNYTN 249
>BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p protein.
Length = 1066
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 168 TDIKSEERK-VRGTGVGEEDCTDEVSSVRGGYVPGRFAAIRRGSVAGTP 311
T ++S R+ ++ TG E D D + GG++ AA RR G P
Sbjct: 973 TPVRSRSRQQLQRTGTDEFDLDDSDAYGAGGHLDADVAAARRTPPRGAP 1021
>BT023839-1|AAZ86760.1| 1174|Drosophila melanogaster IP14658p
protein.
Length = 1174
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 132 IDKLGPPDDAECTDIKSEERKVRGTGVGEEDCTDEVSSVRGGYVPGRFAA 281
+DK G D+ D+K E + + EE ++V S + R AA
Sbjct: 704 LDKFGSDDEEVYEDVKDEADDTKDSNPLEEKADNDVKSSASSWHHARVAA 753
>BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p
protein.
Length = 1125
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 84 RGCMCQLIE--RYRTHYPTIIWGVC 16
RGC+ ++ R+RT PT +W +C
Sbjct: 634 RGCLGSFLKVNRFRTAEPTDLWTIC 658
>BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p
protein.
Length = 1088
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 84 RGCMCQLIE--RYRTHYPTIIWGVC 16
RGC+ ++ R+RT PT +W +C
Sbjct: 597 RGCLGSFLKVNRFRTAEPTDLWTIC 621
>AY118639-1|AAM50008.1| 1173|Drosophila melanogaster SD02424p
protein.
Length = 1173
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 132 IDKLGPPDDAECTDIKSEERKVRGTGVGEEDCTDEVSSVRGGYVPGRFAA 281
+DK G D+ D+K E + + EE ++V S + R AA
Sbjct: 704 LDKFGSDDEEVYEDVKDEADDTKDSSPLEEKADNDVKSSASSWHHARVAA 753
>AL132651-1|CAB65880.1| 1032|Drosophila melanogaster
EG:BACR7A4.10,FBgn0003638;su(w[a]) protein.
Length = 1032
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 132 IDKLGPPDDAECTDIKSEERKVRGTGVGEEDCTDE 236
I GP DD E D + E R + T EED +E
Sbjct: 810 ITYFGPDDDDEVGDQRPEMRLIGSTQKDEEDDDEE 844
>AL109630-17|CAB65879.1| 1032|Drosophila melanogaster
EG:BACR7A4.10,FBgn0003638;su(w[a]) protein.
Length = 1032
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 132 IDKLGPPDDAECTDIKSEERKVRGTGVGEEDCTDE 236
I GP DD E D + E R + T EED +E
Sbjct: 810 ITYFGPDDDDEVGDQRPEMRLIGSTQKDEEDDDEE 844
>AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA,
isoform A protein.
Length = 1088
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 84 RGCMCQLIE--RYRTHYPTIIWGVC 16
RGC+ ++ R+RT PT +W +C
Sbjct: 597 RGCLGSFLKVNRFRTAEPTDLWTIC 621
>AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB,
isoform B protein.
Length = 1125
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 84 RGCMCQLIE--RYRTHYPTIIWGVC 16
RGC+ ++ R+RT PT +W +C
Sbjct: 634 RGCLGSFLKVNRFRTAEPTDLWTIC 658
>AE014296-3583|AAF51750.1| 171|Drosophila melanogaster CG14574-PA
protein.
Length = 171
Score = 26.2 bits (55), Expect = 8.8
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -2
Query: 314 HRCPRDGSSSDRGEAPGDIATAHAGH 237
H CP D D+ PG + H+ H
Sbjct: 135 HNCPNDPRDLDKAPGPGTGQSGHSTH 160
>AE014296-1891|AAF50106.3| 1174|Drosophila melanogaster CG7839-PA
protein.
Length = 1174
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 132 IDKLGPPDDAECTDIKSEERKVRGTGVGEEDCTDEVSSVRGGYVPGRFAA 281
+DK G D+ D+K E + + EE ++V S + R AA
Sbjct: 704 LDKFGSDDEEVYEDVKDEADDTKDSNPLEEKADNDVKSSASSWHHARVAA 753
>AE013599-3866|AAM68312.1| 469|Drosophila melanogaster CG30165-PA
protein.
Length = 469
Score = 26.2 bits (55), Expect = 8.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 174 IKSEERKVRGTGVGEEDCTDEVSSVRGGYVPGRFAAIRRGSVAGTP 311
+ ++++ TG E D D + GG++ AA RR G P
Sbjct: 378 VNKRNQRLQRTGTDEFDLDDSDAYGAGGHLDADVAAARRTPPRGAP 423
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,683,984
Number of Sequences: 53049
Number of extensions: 296610
Number of successful extensions: 982
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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