BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_N10
(509 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2884|AAF49360.1| 550|Drosophila melanogaster CG13724-P... 28 6.4
AF169141-1|AAF22962.1| 1752|Drosophila melanogaster UNC-13 protein. 28 8.4
>AE014296-2884|AAF49360.1| 550|Drosophila melanogaster CG13724-PA
protein.
Length = 550
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 322 IYTFDRCILFFLNIRSFSLGSFIFTI--PHVF 411
+Y F + + FF + F+LG F+FT+ P VF
Sbjct: 384 LYPFVKFVAFFTVLNPFTLGVFLFTLISPAVF 415
>AF169141-1|AAF22962.1| 1752|Drosophila melanogaster UNC-13 protein.
Length = 1752
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -3
Query: 114 FLLKKP--QIIRY*SLIHTQFTTQLIKTF 34
FL K P Q++RY ++TQ T LIKTF
Sbjct: 1534 FLEKSPELQMLRYALSLYTQMTDTLIKTF 1562
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,003,099
Number of Sequences: 53049
Number of extensions: 288027
Number of successful extensions: 691
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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