Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_N10
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61947-2|AAB03135.1|  498|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr...    27   7.9  
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.       27   7.9  

>U61947-2|AAB03135.1|  498|Caenorhabditis elegans Hypothetical
           protein C06G3.6 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 303 IKSIFFNLSSNKIGQECKKLNSKRCYLNNRVQEVS 199
           IKS+  ++S  K+  +C+K   K  + N  V E S
Sbjct: 161 IKSLQKDISEMKLENQCRKKEDKNSFKNKEVHEAS 195


>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
            ZK524.2e protein.
          Length = 1816

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1581 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1615


>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
            ZK524.2d protein.
          Length = 2155

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1920 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1954


>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical protein
            ZK524.2c protein.
          Length = 1475

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1240 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1274


>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1578 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1612


>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
            protein ZK524.2e protein.
          Length = 1816

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1581 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1615


>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
            protein ZK524.2d protein.
          Length = 2155

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1920 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1954


>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1578 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1612


>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
            ZK524.2e protein.
          Length = 1816

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1581 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1615


>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
            ZK524.2d protein.
          Length = 2155

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1920 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1954


>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical protein
            ZK524.2c protein.
          Length = 1475

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1240 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1274


>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1578 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1612


>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
          Length = 1815

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 132  KNISVFFLLKKPQI--IRY*SLIHTQFTTQLIKTF 34
            K +   F  K P++  ++Y   ++TQ T QLIKTF
Sbjct: 1580 KGLKKSFFEKSPELQSLKYALSLYTQTTEQLIKTF 1614


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,913,651
Number of Sequences: 27780
Number of extensions: 173063
Number of successful extensions: 418
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)